Kajava AV - Search Results

1

Estimation of amyloid aggregate sizes with semi-denaturing detergent agarose gel electrophoresis and its limitations.

Drozdova PB, Barbitoff YA, Belousov MV, Skitchenko RK, Rogoza TM, Leclercq JY, Kajava AV, Matveenko AG, Zhouravleva GA, Bondarev SA. Drozdova PB, et al. Among authors: kajava av. Prion. 2020 Dec;14(1):118-128. doi: 10.1080/19336896.2020.1751574. Prion. 2020. PMID: 32306832 Free PMC article.

2

Effect of charged residues in the N-domain of Sup35 protein on prion [PSI+] stability and propagation.

Bondarev SA, Shchepachev VV, Kajava AV, Zhouravleva GA. Bondarev SA, et al. Among authors: kajava av. J Biol Chem. 2013 Oct 4;288(40):28503-13. doi: 10.1074/jbc.M113.471805. Epub 2013 Aug 21. J Biol Chem. 2013. PMID: 23965990 Free PMC article.

3

Structure-based view on [PSI(+)] prion properties.

Bondarev SA, Zhouravleva GA, Belousov MV, Kajava AV. Bondarev SA, et al. Among authors: kajava av. Prion. 2015;9(3):190-9. doi: 10.1080/19336896.2015.1044186. Prion. 2015. PMID: 26030475 Free PMC article. Review.

4

BetaSerpentine: a bioinformatics tool for reconstruction of amyloid structures.

Bondarev SA, Bondareva OV, Zhouravleva GA, Kajava AV. Bondarev SA, et al. Among authors: kajava av. Bioinformatics. 2018 Feb 15;34(4):599-608. doi: 10.1093/bioinformatics/btx629. Bioinformatics. 2018. PMID: 29444233

5

Protein Co-Aggregation Related to Amyloids: Methods of Investigation, Diversity, and Classification.

Bondarev SA, Antonets KS, Kajava AV, Nizhnikov AA, Zhouravleva GA. Bondarev SA, et al. Among authors: kajava av. Int J Mol Sci. 2018 Aug 4;19(8):2292. doi: 10.3390/ijms19082292. Int J Mol Sci. 2018. PMID: 30081572 Free PMC article. Review.

6

Design of a New [PSI ⁺]-No-More Mutation in SUP35 With Strong Inhibitory Effect on the [PSI ⁺] Prion Propagation.

Danilov LG, Matveenko AG, Ryzhkova VE, Belousov MV, Poleshchuk OI, Likholetova DV, Sokolov PA, Kasyanenko NA, Kajava AV, Zhouravleva GA, Bondarev SA. Danilov LG, et al. Among authors: kajava av. Front Mol Neurosci. 2019 Nov 19;12:274. doi: 10.3389/fnmol.2019.00274. eCollection 2019. Front Mol Neurosci. 2019. PMID: 31803017 Free PMC article.

7

Census of halide-binding sites in protein structures.

Skitchenko RK, Usoltsev D, Uspenskaya M, Kajava AV, Guskov A. Skitchenko RK, et al. Among authors: kajava av. Bioinformatics. 2020 May 1;36(10):3064-3071. doi: 10.1093/bioinformatics/btaa079. Bioinformatics. 2020. PMID: 32022861 Free PMC article.

8

Tally-2.0: upgraded validator of tandem repeat detection in protein sequences.

Perovic V, Leclercq JY, Sumonja N, Richard FD, Veljkovic N, Kajava AV. Perovic V, et al. Among authors: kajava av. Bioinformatics. 2020 May 1;36(10):3260-3262. doi: 10.1093/bioinformatics/btaa121. Bioinformatics. 2020. PMID: 32096820 Free PMC article.

9

TAPASS: Tool for annotation of protein amyloidogenicity in the context of other structural states.

Falgarone T, Villain É, Guettaf A, Leclercq J, Kajava AV. Falgarone T, et al. Among authors: kajava av. J Struct Biol. 2022 Mar;214(1):107840. doi: 10.1016/j.jsb.2022.107840. Epub 2022 Feb 8. J Struct Biol. 2022. PMID: 35149212

10

Usage of a dataset of NMR resolved protein structures to test aggregation versus solubility prediction algorithms.

Roche DB, Villain E, Kajava AV. Roche DB, et al. Among authors: kajava av. Protein Sci. 2017 Sep;26(9):1864-1869. doi: 10.1002/pro.3225. Epub 2017 Jul 15. Protein Sci. 2017. PMID: 28685932 Free PMC article.

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