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Model-based assessment of mammalian cell metabolic functionalities using omics data.
Richelle A, Kellman BP, Wenzel AT, Chiang AWT, Reagan T, Gutierrez JM, Joshi C, Li S, Liu JK, Masson H, Lee J, Li Z, Heirendt L, Trefois C, Juarez EF, Bath T, Borland D, Mesirov JP, Robasky K, Lewis NE. Richelle A, et al. Among authors: joshi c. Cell Rep Methods. 2021 Jul 26;1(3):100040. doi: 10.1016/j.crmeth.2021.100040. Epub 2021 Jun 30. Cell Rep Methods. 2021. PMID: 34761247 Free PMC article.
Modeling Meets Metabolomics-The WormJam Consensus Model as Basis for Metabolic Studies in the Model Organism Caenorhabditis elegans.
Witting M, Hastings J, Rodriguez N, Joshi CJ, Hattwell JPN, Ebert PR, van Weeghel M, Gao AW, Wakelam MJO, Houtkooper RH, Mains A, Le Novère N, Sadykoff S, Schroeder F, Lewis NE, Schirra HJ, Kaleta C, Casanueva O. Witting M, et al. Among authors: joshi cj. Front Mol Biosci. 2018 Nov 14;5:96. doi: 10.3389/fmolb.2018.00096. eCollection 2018. Front Mol Biosci. 2018. PMID: 30488036 Free PMC article.
What are housekeeping genes?
Joshi CJ, Ke W, Drangowska-Way A, O'Rourke EJ, Lewis NE. Joshi CJ, et al. PLoS Comput Biol. 2022 Jul 13;18(7):e1010295. doi: 10.1371/journal.pcbi.1010295. eCollection 2022 Jul. PLoS Comput Biol. 2022. PMID: 35830477 Free PMC article.
Inferring a spatial code of cell-cell interactions across a whole animal body.
Armingol E, Ghaddar A, Joshi CJ, Baghdassarian H, Shamie I, Chan J, Her HL, Berhanu S, Dar A, Rodriguez-Armstrong F, Yang O, O'Rourke EJ, Lewis NE. Armingol E, et al. PLoS Comput Biol. 2022 Nov 17;18(11):e1010715. doi: 10.1371/journal.pcbi.1010715. eCollection 2022 Nov. PLoS Comput Biol. 2022. PMID: 36395331 Free PMC article.
804 results