Jonić S - Search Results

1

Advances in Xmipp for Cryo-Electron Microscopy: From Xmipp to Scipion.

Strelak D, Jiménez-Moreno A, Vilas JL, Ramírez-Aportela E, Sánchez-García R, Maluenda D, Vargas J, Herreros D, Fernández-Giménez E, de Isidro-Gómez FP, Horacek J, Myska D, Horacek M, Conesa P, Fonseca-Reyna YC, Jiménez J, Martínez M, Harastani M, Jonić S, Filipovic J, Marabini R, Carazo JM, Sorzano COS. Strelak D, et al. Among authors: jonic s. Molecules. 2021 Oct 15;26(20):6224. doi: 10.3390/molecules26206224. Molecules. 2021. PMID: 34684805 Free PMC article.

2

A multiresolution approach to orientation assignment in 3D electron microscopy of single particles.

Sorzano CO, Jonić S, El-Bez C, Carazo JM, De Carlo S, Thévenaz P, Unser M. Sorzano CO, et al. Among authors: jonic s. J Struct Biol. 2004 Jun;146(3):381-92. doi: 10.1016/j.jsb.2004.01.006. J Struct Biol. 2004. PMID: 15099579

3

A novel method for improvement of visualization of power spectra for sorting cryo-electron micrographs and their local areas.

Jonić S, Sorzano CO, Cottevieille M, Larquet E, Boisset N. Jonić S, et al. J Struct Biol. 2007 Jan;157(1):156-67. doi: 10.1016/j.jsb.2006.06.014. Epub 2006 Aug 11. J Struct Biol. 2007. PMID: 16987671

4

Fast, robust, and accurate determination of transmission electron microscopy contrast transfer function.

Sorzano CO, Jonic S, Núñez-Ramírez R, Boisset N, Carazo JM. Sorzano CO, et al. Among authors: jonic s. J Struct Biol. 2007 Nov;160(2):249-62. doi: 10.1016/j.jsb.2007.08.013. Epub 2007 Aug 29. J Struct Biol. 2007. PMID: 17911028

5

Comparison of single-particle analysis and electron tomography approaches: an overview.

Jonić S, Sorzano CO, Boisset N. Jonić S, et al. J Microsc. 2008 Dec;232(3):562-79. doi: 10.1111/j.1365-2818.2008.02119.x. J Microsc. 2008. PMID: 19094041 Review.

6

FASTDEF: fast defocus and astigmatism estimation for high-throughput transmission electron microscopy.

Vargas J, Otón J, Marabini R, Jonic S, de la Rosa-Trevín JM, Carazo JM, Sorzano CO. Vargas J, et al. Among authors: jonic s. J Struct Biol. 2013 Feb;181(2):136-48. doi: 10.1016/j.jsb.2012.12.006. Epub 2012 Dec 20. J Struct Biol. 2013. PMID: 23261401

7

3DEM Loupe: Analysis of macromolecular dynamics using structures from electron microscopy.

Nogales-Cadenas R, Jonic S, Tama F, Arteni AA, Tabas-Madrid D, Vázquez M, Pascual-Montano A, Sorzano CO. Nogales-Cadenas R, et al. Among authors: jonic s. Nucleic Acids Res. 2013 Jul;41(Web Server issue):W363-7. doi: 10.1093/nar/gkt385. Epub 2013 May 13. Nucleic Acids Res. 2013. PMID: 23671335 Free PMC article.

8

CTF Challenge: Result summary.

Marabini R, Carragher B, Chen S, Chen J, Cheng A, Downing KH, Frank J, Grassucci RA, Bernard Heymann J, Jiang W, Jonic S, Liao HY, Ludtke SJ, Patwari S, Piotrowski AL, Quintana A, Sorzano CO, Stahlberg H, Vargas J, Voss NR, Chiu W, Carazo JM. Marabini R, et al. Among authors: jonic s. J Struct Biol. 2015 Jun;190(3):348-59. doi: 10.1016/j.jsb.2015.04.003. Epub 2015 Apr 23. J Struct Biol. 2015. PMID: 25913484 Free PMC article.

9

Denoising of high-resolution single-particle electron-microscopy density maps by their approximation using three-dimensional Gaussian functions.

Jonić S, Vargas J, Melero R, Gómez-Blanco J, Carazo JM, Sorzano CO. Jonić S, et al. J Struct Biol. 2016 Jun;194(3):423-33. doi: 10.1016/j.jsb.2016.04.007. Epub 2016 Apr 13. J Struct Biol. 2016. PMID: 27085420

10

Local analysis of strains and rotations for macromolecular electron microscopy maps.

Sorzano CO, Martín-Ramos A, Prieto F, Melero R, Martín-Benito J, Jonic S, Navas-Calvente J, Vargas J, Otón J, Abrishami V, de la Rosa-Trevín JM, Gómez-Blanco J, Vilas JL, Marabini R, Carazo JM. Sorzano CO, et al. Among authors: jonic s. J Struct Biol. 2016 Jul;195(1):123-8. doi: 10.1016/j.jsb.2016.04.001. Epub 2016 Apr 19. J Struct Biol. 2016. PMID: 27102900

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