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Instructional Models for Course-Based Research Experience (CRE) Teaching.
Hanauer DI, Graham MJ, Arnold RJ, Ayuk MA, Balish MF, Beyer AR, Butela KA, Byrum CA, Chia CP, Chung HM, Clase KL, Conant S, Coomans RJ, D'Elia T, Diaz J, Diaz A, Doty JA, Edgington NP, Edwards DC, Eivazova E, Emmons CB, Fast KM, Fisher EJ, Fleischacker CL, Frederick GD, Freise AC, Gainey MD, Gissendanner CR, Golebiewska UP, Guild NA, Hendrickson HL, Herren CD, Hopson-Fernandes MS, Hughes LE, Jacobs-Sera D, Johnson AA, Kirkpatrick BL, Klyczek KK, Koga AP, Kotturi H, LeBlanc-Straceski J, Lee-Soety JY, Leonard JE, Mastropaolo MD, Merkhofer EC, Michael SF, Mitchell JC, Mohan S, Monti DL, Noutsos C, Nsa IY, Peters NT, Plymale R, Pollenz RS, Porter ML, Rinehart CA, Rosas-Acosta G, Ross JF, Rubin MR, Scherer AE, Schroeder SC, Shaffer CD, Sprenkle AB, Sunnen CN, Swerdlow SJ, Tobiason D, Tolsma SS, Tsourkas PK, Ward RE, Ware VC, Warner MH, Washington JM, Westover KM, White SJ, Whitefleet-Smith JL, Williams DC, Wolyniak MJ, Zeilstra-Ryalls JH, Asai DJ, Hatfull GF, Sivanathan V. Hanauer DI, et al. Among authors: johnson aa. CBE Life Sci Educ. 2022 Mar;21(1):ar8. doi: 10.1187/cbe.21-03-0057. CBE Life Sci Educ. 2022. PMID: 34978921 Free PMC article.
A broadly implementable research course in phage discovery and genomics for first-year undergraduate students.
Jordan TC, Burnett SH, Carson S, Caruso SM, Clase K, DeJong RJ, Dennehy JJ, Denver DR, Dunbar D, Elgin SC, Findley AM, Gissendanner CR, Golebiewska UP, Guild N, Hartzog GA, Grillo WH, Hollowell GP, Hughes LE, Johnson A, King RA, Lewis LO, Li W, Rosenzweig F, Rubin MR, Saha MS, Sandoz J, Shaffer CD, Taylor B, Temple L, Vazquez E, Ware VC, Barker LP, Bradley KW, Jacobs-Sera D, Pope WH, Russell DA, Cresawn SG, Lopatto D, Bailey CP, Hatfull GF. Jordan TC, et al. mBio. 2014 Feb 4;5(1):e01051-13. doi: 10.1128/mBio.01051-13. mBio. 2014. PMID: 24496795 Free PMC article.
Prophage-mediated defence against viral attack and viral counter-defence.
Dedrick RM, Jacobs-Sera D, Bustamante CA, Garlena RA, Mavrich TN, Pope WH, Reyes JC, Russell DA, Adair T, Alvey R, Bonilla JA, Bricker JS, Brown BR, Byrnes D, Cresawn SG, Davis WB, Dickson LA, Edgington NP, Findley AM, Golebiewska U, Grose JH, Hayes CF, Hughes LE, Hutchison KW, Isern S, Johnson AA, Kenna MA, Klyczek KK, Mageeney CM, Michael SF, Molloy SD, Montgomery MT, Neitzel J, Page ST, Pizzorno MC, Poxleitner MK, Rinehart CA, Robinson CJ, Rubin MR, Teyim JN, Vazquez E, Ware VC, Washington J, Hatfull GF. Dedrick RM, et al. Among authors: johnson aa. Nat Microbiol. 2017 Jan 9;2:16251. doi: 10.1038/nmicrobiol.2016.251. Nat Microbiol. 2017. PMID: 28067906 Free PMC article.
An inclusive Research Education Community (iREC): Impact of the SEA-PHAGES program on research outcomes and student learning.
Hanauer DI, Graham MJ; SEA-PHAGES; Betancur L, Bobrownicki A, Cresawn SG, Garlena RA, Jacobs-Sera D, Kaufmann N, Pope WH, Russell DA, Jacobs WR Jr, Sivanathan V, Asai DJ, Hatfull GF. Hanauer DI, et al. Proc Natl Acad Sci U S A. 2017 Dec 19;114(51):13531-13536. doi: 10.1073/pnas.1718188115. Epub 2017 Dec 5. Proc Natl Acad Sci U S A. 2017. PMID: 29208718 Free PMC article.
Complete Genome Sequences of Bacillus cereus Group Phages AaronPhadgers, ALPS, Beyonphe, Bubs, KamFam, OmnioDeoPrimus, Phireball, PPIsBest, YungSlug, and Zainny.
Kostyk N, Chigbu O, Cochran E, Davis J, Essig J, Do L, Farooque N, Gbadamosi Z, Gnanodayan A, Hale A, Islam N, Ismail A, Jordan A, Karamsetty K, Tanner P, Warrier R, Zaman H, Johnson AA; 2017 to 2020 VCU Phage Hunters. Kostyk N, et al. Among authors: johnson aa. Microbiol Resour Announc. 2021 Aug 19;10(33):e0030021. doi: 10.1128/MRA.00300-21. Epub 2021 Aug 19. Microbiol Resour Announc. 2021. PMID: 34410150 Free PMC article.
Crowdsourcing biocuration: The Community Assessment of Community Annotation with Ontologies (CACAO).
Ramsey J, McIntosh B, Renfro D, Aleksander SA, LaBonte S, Ross C, Zweifel AE, Liles N, Farrar S, Gill JJ, Erill I, Ades S, Berardini TZ, Bennett JA, Brady S, Britton R, Carbon S, Caruso SM, Clements D, Dalia R, Defelice M, Doyle EL, Friedberg I, Gurney SMR, Hughes L, Johnson A, Kowalski JM, Li D, Lovering RC, Mans TL, McCarthy F, Moore SD, Murphy R, Paustian TD, Perdue S, Peterson CN, Prüß BM, Saha MS, Sheehy RR, Tansey JT, Temple L, Thorman AW, Trevino S, Vollmer AC, Walbot V, Willey J, Siegele DA, Hu JC. Ramsey J, et al. PLoS Comput Biol. 2021 Oct 28;17(10):e1009463. doi: 10.1371/journal.pcbi.1009463. eCollection 2021 Oct. PLoS Comput Biol. 2021. PMID: 34710081 Free PMC article.
232 results