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The Taxon Hypothesis Paradigm-On the Unambiguous Detection and Communication of Taxa.
Microorganisms. 2020 Nov 30;8(12):1910. doi: 10.3390/microorganisms8121910.
Microorganisms. 2020.
PMID: 33266327
Free PMC article.
Molecular phylogenetics and delimitation of species in Cortinarius section Calochroi (Basidiomycota, Agaricales) in Europe.
Frøslev TG, Jeppesen TS, Laessøe T, Kjøller R.
Frøslev TG, et al. Among authors: jeppesen ts.
Mol Phylogenet Evol. 2007 Jul;44(1):217-27. doi: 10.1016/j.ympev.2006.11.013. Epub 2006 Nov 26.
Mol Phylogenet Evol. 2007.
PMID: 17197201
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Determining threshold values for barcoding fungi: lessons from Cortinarius (Basidiomycota), a highly diverse and widespread ectomycorrhizal genus.
Garnica S, Schön ME, Abarenkov K, Riess K, Liimatainen K, Niskanen T, Dima B, Soop K, Frøslev TG, Jeppesen TS, Peintner U, Kuhnert-Finkernagel R, Brandrud TE, Saar G, Oertel B, Ammirati JF.
Garnica S, et al. Among authors: jeppesen ts.
FEMS Microbiol Ecol. 2016 Apr;92(4):fiw045. doi: 10.1093/femsec/fiw045. Epub 2016 Feb 28.
FEMS Microbiol Ecol. 2016.
PMID: 26929438
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Considerations and consequences of allowing DNA sequence data as types of fungal taxa.
Zamora JC, Svensson M, Kirschner R, Olariaga I, Ryman S, Parra LA, Geml J, Rosling A, Adamčík S, Ahti T, Aime MC, Ainsworth AM, Albert L, Albertó E, García AA, Ageev D, Agerer R, Aguirre-Hudson B, Ammirati J, Andersson H, Angelini C, Antonín V, Aoki T, Aptroot A, Argaud D, Sosa BIA, Aronsen A, Arup U, Asgari B, Assyov B, Atienza V, Bandini D, Baptista-Ferreira JL, Baral HO, Baroni T, Barreto RW, Beker H, Bell A, Bellanger JM, Bellù F, Bemmann M, Bendiksby M, Bendiksen E, Bendiksen K, Benedek L, Bérešová-Guttová A, Berger F, Berndt R, Bernicchia A, Biketova AY, Bizio E, Bjork C, Boekhout T, Boertmann D, Böhning T, Boittin F, Boluda CG, Boomsluiter MW, Borovička J, Brandrud TE, Braun U, Brodo I, Bulyonkova T, Burdsall HH Jr, Buyck B, Burgaz AR, Calatayud V, Callac P, Campo E, Candusso M, Capoen B, Carbó J, Carbone M, Castañeda-Ruiz RF, Castellano MA, Chen J, Clerc P, Consiglio G, Corriol G, Courtecuisse R, Crespo A, Cripps C, Crous PW, da Silva GA, da Silva M, Dam M, Dam N, Dämmrich F, Das K, Davies L, De Crop E, De Kesel A, De Lange R, De Madrignac Bonzi B, Dela Cruz TEE, Delgat L, Demoulin V, Desjardin DE, Diederich P, Dima B, Dios MM, Divakar PK, Douanla-Meli C, Douglas B, Drechs…
See abstract for full author list ➔
Zamora JC, et al. Among authors: jeppesen ts.
IMA Fungus. 2018 Jun;9(1):167-175. doi: 10.5598/imafungus.2018.09.01.10. Epub 2018 May 24.
IMA Fungus. 2018.
PMID: 30018877
Free PMC article.
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The UNITE database for molecular identification of fungi: handling dark taxa and parallel taxonomic classifications.
Nilsson RH, Larsson KH, Taylor AFS, Bengtsson-Palme J, Jeppesen TS, Schigel D, Kennedy P, Picard K, Glöckner FO, Tedersoo L, Saar I, Kõljalg U, Abarenkov K.
Nilsson RH, et al. Among authors: jeppesen ts.
Nucleic Acids Res. 2019 Jan 8;47(D1):D259-D264. doi: 10.1093/nar/gky1022.
Nucleic Acids Res. 2019.
PMID: 30371820
Free PMC article.
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The UNITE database for molecular identification and taxonomic communication of fungi and other eukaryotes: sequences, taxa and classifications reconsidered.
Abarenkov K, Nilsson RH, Larsson KH, Taylor AFS, May TW, Frøslev TG, Pawlowska J, Lindahl B, Põldmaa K, Truong C, Vu D, Hosoya T, Niskanen T, Piirmann T, Ivanov F, Zirk A, Peterson M, Cheeke TE, Ishigami Y, Jansson AT, Jeppesen TS, Kristiansson E, Mikryukov V, Miller JT, Oono R, Ossandon FJ, Paupério J, Saar I, Schigel D, Suija A, Tedersoo L, Kõljalg U.
Abarenkov K, et al. Among authors: jeppesen ts.
Nucleic Acids Res. 2024 Jan 5;52(D1):D791-D797. doi: 10.1093/nar/gkad1039.
Nucleic Acids Res. 2024.
PMID: 37953409
Free PMC article.
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Automatic Fungi Recognition: Deep Learning Meets Mycology.
Picek L, Šulc M, Matas J, Heilmann-Clausen J, Jeppesen TS, Lind E.
Picek L, et al. Among authors: jeppesen ts.
Sensors (Basel). 2022 Jan 14;22(2):633. doi: 10.3390/s22020633.
Sensors (Basel). 2022.
PMID: 35062595
Free PMC article.
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