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Altered chromosomal topology drives oncogenic programs in SDH-deficient GISTs.
Flavahan WA, Drier Y, Johnstone SE, Hemming ML, Tarjan DR, Hegazi E, Shareef SJ, Javed NM, Raut CP, Eschle BK, Gokhale PC, Hornick JL, Sicinska ET, Demetri GD, Bernstein BE. Flavahan WA, et al. Among authors: javed nm. Nature. 2019 Nov;575(7781):229-233. doi: 10.1038/s41586-019-1668-3. Epub 2019 Oct 16. Nature. 2019. PMID: 31666694 Free PMC article.
Integrative dissection of gene regulatory elements at base resolution.
Chen Z, Javed N, Moore M, Wu J, Sun G, Vinyard M, Collins A, Pinello L, Najm FJ, Bernstein BE. Chen Z, et al. Cell Genom. 2023 Apr 28;3(6):100318. doi: 10.1016/j.xgen.2023.100318. eCollection 2023 Jun 14. Cell Genom. 2023. PMID: 37388913 Free PMC article.
Modeling epigenetic lesions that cause gliomas.
Rahme GJ, Javed NM, Puorro KL, Xin S, Hovestadt V, Johnstone SE, Bernstein BE. Rahme GJ, et al. Among authors: javed nm. Cell. 2023 Aug 17;186(17):3674-3685.e14. doi: 10.1016/j.cell.2023.06.022. Epub 2023 Jul 25. Cell. 2023. PMID: 37494934