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Altered chromosomal topology drives oncogenic programs in SDH-deficient GISTs.
Nature. 2019 Nov;575(7781):229-233. doi: 10.1038/s41586-019-1668-3. Epub 2019 Oct 16.
Nature. 2019.
PMID: 31666694
Free PMC article.
Detecting sample swaps in diverse NGS data types using linkage disequilibrium.
Javed N, Farjoun Y, Fennell TJ, Epstein CB, Bernstein BE, Shoresh N.
Javed N, et al.
Nat Commun. 2020 Jul 29;11(1):3697. doi: 10.1038/s41467-020-17453-5.
Nat Commun. 2020.
PMID: 32728101
Free PMC article.
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Integrative dissection of gene regulatory elements at base resolution.
Chen Z, Javed N, Moore M, Wu J, Sun G, Vinyard M, Collins A, Pinello L, Najm FJ, Bernstein BE.
Chen Z, et al.
Cell Genom. 2023 Apr 28;3(6):100318. doi: 10.1016/j.xgen.2023.100318. eCollection 2023 Jun 14.
Cell Genom. 2023.
PMID: 37388913
Free PMC article.
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Modeling epigenetic lesions that cause gliomas.
Rahme GJ, Javed NM, Puorro KL, Xin S, Hovestadt V, Johnstone SE, Bernstein BE.
Rahme GJ, et al. Among authors: javed nm.
Cell. 2023 Aug 17;186(17):3674-3685.e14. doi: 10.1016/j.cell.2023.06.022. Epub 2023 Jul 25.
Cell. 2023.
PMID: 37494934
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