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Can exascale computing and explainable artificial intelligence applied to plant biology deliver on the United Nations sustainable development goals?
Streich J, Romero J, Gazolla JGFM, Kainer D, Cliff A, Prates ET, Brown JB, Khoury S, Tuskan GA, Garvin M, Jacobson D, Harfouche AL. Streich J, et al. Among authors: jacobson d. Curr Opin Biotechnol. 2020 Feb;61:217-225. doi: 10.1016/j.copbio.2020.01.010. Epub 2020 Feb 18. Curr Opin Biotechnol. 2020. PMID: 32086132 Review.
Characterization of DWARF14 Genes in Populus.
Zheng K, Wang X, Weighill DA, Guo HB, Xie M, Yang Y, Yang J, Wang S, Jacobson DA, Guo H, Muchero W, Tuskan GA, Chen JG. Zheng K, et al. Sci Rep. 2016 Feb 15;6:21593. doi: 10.1038/srep21593. Sci Rep. 2016. PMID: 26875827 Free PMC article.
Transcript, protein and metabolite temporal dynamics in the CAM plant Agave.
Abraham PE, Yin H, Borland AM, Weighill D, Lim SD, De Paoli HC, Engle N, Jones PC, Agh R, Weston DJ, Wullschleger SD, Tschaplinski T, Jacobson D, Cushman JC, Hettich RL, Tuskan GA, Yang X. Abraham PE, et al. Among authors: jacobson d. Nat Plants. 2016 Nov 21;2:16178. doi: 10.1038/nplants.2016.178. Nat Plants. 2016. PMID: 27869799
The Kalanchoë genome provides insights into convergent evolution and building blocks of crassulacean acid metabolism.
Yang X, Hu R, Yin H, Jenkins J, Shu S, Tang H, Liu D, Weighill DA, Cheol Yim W, Ha J, Heyduk K, Goodstein DM, Guo HB, Moseley RC, Fitzek E, Jawdy S, Zhang Z, Xie M, Hartwell J, Grimwood J, Abraham PE, Mewalal R, Beltrán JD, Boxall SF, Dever LV, Palla KJ, Albion R, Garcia T, Mayer JA, Don Lim S, Man Wai C, Peluso P, Van Buren R, De Paoli HC, Borland AM, Guo H, Chen JG, Muchero W, Yin Y, Jacobson DA, Tschaplinski TJ, Hettich RL, Ming R, Winter K, Leebens-Mack JH, Smith JAC, Cushman JC, Schmutz J, Tuskan GA. Yang X, et al. Among authors: jacobson da. Nat Commun. 2017 Dec 1;8(1):1899. doi: 10.1038/s41467-017-01491-7. Nat Commun. 2017. PMID: 29196618 Free PMC article.
Defining the genetic components of callus formation: A GWAS approach.
Tuskan GA, Mewalal R, Gunter LE, Palla KJ, Carter K, Jacobson DA, Jones PC, Garcia BJ, Weighill DA, Hyatt PD, Yang Y, Zhang J, Reis N, Chen JG, Muchero W. Tuskan GA, et al. Among authors: jacobson da. PLoS One. 2018 Aug 17;13(8):e0202519. doi: 10.1371/journal.pone.0202519. eCollection 2018. PLoS One. 2018. PMID: 30118526 Free PMC article.
Hardwood Tree Genomics: Unlocking Woody Plant Biology.
Tuskan GA, Groover AT, Schmutz J, DiFazio SP, Myburg A, Grattapaglia D, Smart LB, Yin T, Aury JM, Kremer A, Leroy T, Le Provost G, Plomion C, Carlson JE, Randall J, Westbrook J, Grimwood J, Muchero W, Jacobson D, Michener JK. Tuskan GA, et al. Among authors: jacobson d. Front Plant Sci. 2018 Dec 17;9:1799. doi: 10.3389/fpls.2018.01799. eCollection 2018. Front Plant Sci. 2018. PMID: 30619389 Free PMC article.
Multitrait genome-wide association analysis of Populus trichocarpa identifies key polymorphisms controlling morphological and physiological traits.
Chhetri HB, Macaya-Sanz D, Kainer D, Biswal AK, Evans LM, Chen JG, Collins C, Hunt K, Mohanty SS, Rosenstiel T, Ryno D, Winkeler K, Yang X, Jacobson D, Mohnen D, Muchero W, Strauss SH, Tschaplinski TJ, Tuskan GA, DiFazio SP. Chhetri HB, et al. Among authors: jacobson d. New Phytol. 2019 Jul;223(1):293-309. doi: 10.1111/nph.15777. Epub 2019 Apr 8. New Phytol. 2019. PMID: 30843213 Free article.
Multi-Phenotype Association Decomposition: Unraveling Complex Gene-Phenotype Relationships.
Weighill D, Jones P, Bleker C, Ranjan P, Shah M, Zhao N, Martin M, DiFazio S, Macaya-Sanz D, Schmutz J, Sreedasyam A, Tschaplinski T, Tuskan G, Jacobson D. Weighill D, et al. Among authors: jacobson d. Front Genet. 2019 May 10;10:417. doi: 10.3389/fgene.2019.00417. eCollection 2019. Front Genet. 2019. PMID: 31134130 Free PMC article.
916 results