Jacob Machado D - Search Results

1

Fundamental evolution of all Orthocoronavirinae including three deadly lineages descendent from Chiroptera-hosted coronaviruses: SARS-CoV, MERS-CoV and SARS-CoV-2.

Jacob Machado D, Scott R, Guirales S, Janies DA. Jacob Machado D, et al. Cladistics. 2021 Oct;37(5):461-488. doi: 10.1111/cla.12454. Epub 2021 Apr 26. Cladistics. 2021. PMID: 34570933 Free PMC article.

2

[No title available]

[No authors listed] [No authors listed] PMID: 34219906

3

FLAVi: An Enhanced Annotator for Viral Genomes of Flaviviridae.

de Bernadi Schneider A, Jacob Machado D, Guirales S, Janies DA. de Bernadi Schneider A, et al. Among authors: jacob machado d. Viruses. 2020 Aug 14;12(8):892. doi: 10.3390/v12080892. Viruses. 2020. PMID: 32824044 Free PMC article.

4

Fundamentals of genomic epidemiology, lessons learned from the coronavirus disease 2019 (COVID-19) pandemic, and new directions.

Jacob Machado D, White RA 3rd, Kofsky J, Janies DA. Jacob Machado D, et al. Antimicrob Steward Healthc Epidemiol. 2021 Dec 7;1(1):e60. doi: 10.1017/ash.2021.222. eCollection 2021. Antimicrob Steward Healthc Epidemiol. 2021. PMID: 36168505 Free PMC article. Review.

5

A new strategy to infer circularity applied to four new complete frog mitogenomes.

Jacob Machado D, Janies D, Brouwer C, Grant T. Jacob Machado D, et al. Ecol Evol. 2018 Mar 25;8(8):4011-4018. doi: 10.1002/ece3.3918. eCollection 2018 Apr. Ecol Evol. 2018. PMID: 29721275 Free PMC article.

6

An empirical test of the relationship between the bootstrap and likelihood ratio support in maximum likelihood phylogenetic analysis.

Jacob Machado D, Portella de Luna Marques F, Jiménez-Ferbans L, Grant T. Jacob Machado D, et al. Cladistics. 2022 Jun;38(3):392-401. doi: 10.1111/cla.12496. Epub 2021 Dec 21. Cladistics. 2022. PMID: 34932221

7

Evidence of absence treated as absence of evidence: The effects of variation in the number and distribution of gaps treated as missing data on the results of standard maximum likelihood analysis.

Jacob Machado D, Castroviejo-Fisher S, Grant T. Jacob Machado D, et al. Mol Phylogenet Evol. 2021 Jan;154:106966. doi: 10.1016/j.ympev.2020.106966. Epub 2020 Sep 22. Mol Phylogenet Evol. 2021. PMID: 32971285

8

Comparative Characterization of Mitogenomes From Five Orders of Cestodes (Eucestoda: Tapeworms).

Trevisan B, Jacob Machado D, Lahr DJG, Marques FPL. Trevisan B, et al. Among authors: jacob machado d. Front Genet. 2021 Dec 22;12:788871. doi: 10.3389/fgene.2021.788871. eCollection 2021. Front Genet. 2021. PMID: 35003223 Free PMC article.

9

Editorial: Phylogenetics in the one health context.

Jacob Machado D, Jiménez-Ferbans L, Ocaña K, de Bernardi Schneider A. Jacob Machado D, et al. Front Microbiol. 2023 Oct 26;14:1307616. doi: 10.3389/fmicb.2023.1307616. eCollection 2023. Front Microbiol. 2023. PMID: 37965546 Free PMC article. No abstract available.

10

Echinoderm radial glia in adult cell renewal, indeterminate growth, and regeneration.

Mashanov V, Ademiluyi S, Jacob Machado D, Reid R, Janies D. Mashanov V, et al. Among authors: jacob machado d. Front Neural Circuits. 2023 Sep 29;17:1258370. doi: 10.3389/fncir.2023.1258370. eCollection 2023. Front Neural Circuits. 2023. PMID: 37841894 Free PMC article. Review.

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