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Large-scale benchmarking of circRNA detection tools reveals large differences in sensitivity but not in precision.
Vromman M, Anckaert J, Bortoluzzi S, Buratin A, Chen CY, Chu Q, Chuang TJ, Dehghannasiri R, Dieterich C, Dong X, Flicek P, Gaffo E, Gu W, He C, Hoffmann S, Izuogu O, Jackson MS, Jakobi T, Lai EC, Nuytens J, Salzman J, Santibanez-Koref M, Stadler P, Thas O, Vanden Eynde E, Verniers K, Wen G, Westholm J, Yang L, Ye CY, Yigit N, Yuan GH, Zhang J, Zhao F, Vandesompele J, Volders PJ. Vromman M, et al. Among authors: jackson ms. Nat Methods. 2023 Aug;20(8):1159-1169. doi: 10.1038/s41592-023-01944-6. Epub 2023 Jul 13. Nat Methods. 2023. PMID: 37443337 Free PMC article.
Circular RNA enrichment in platelets is a signature of transcriptome degradation.
Alhasan AA, Izuogu OG, Al-Balool HH, Steyn JS, Evans A, Colzani M, Ghevaert C, Mountford JC, Marenah L, Elliott DJ, Santibanez-Koref M, Jackson MS. Alhasan AA, et al. Among authors: jackson ms. Blood. 2016 Mar 3;127(9):e1-e11. doi: 10.1182/blood-2015-06-649434. Epub 2015 Dec 10. Blood. 2016. PMID: 26660425 Free PMC article.
An integrated transcriptional analysis of the developing human retina.
Mellough CB, Bauer R, Collin J, Dorgau B, Zerti D, Dolan DWP, Jones CM, Izuogu OG, Yu M, Hallam D, Steyn JS, White K, Steel DH, Santibanez-Koref M, Elliott DJ, Jackson MS, Lindsay S, Grellscheid S, Lako M. Mellough CB, et al. Among authors: jackson ms. Development. 2019 Jan 29;146(2):dev169474. doi: 10.1242/dev.169474. Development. 2019. PMID: 30696714 Free PMC article.
Evidence for widespread reticulate evolution within human duplicons.
Jackson MS, Oliver K, Loveland J, Humphray S, Dunham I, Rocchi M, Viggiano L, Park JP, Hurles ME, Santibanez-Koref M. Jackson MS, et al. Am J Hum Genet. 2005 Nov;77(5):824-40. doi: 10.1086/497704. Epub 2005 Sep 30. Am J Hum Genet. 2005. PMID: 16252241 Free PMC article.
Identification of candidate genes involved in neuroblastoma progression by combining genomic and expression microarrays with survival data.
Łastowska M, Viprey V, Santibanez-Koref M, Wappler I, Peters H, Cullinane C, Roberts P, Hall AG, Tweddle DA, Pearson AD, Lewis I, Burchill SA, Jackson MS. Łastowska M, et al. Among authors: jackson ms. Oncogene. 2007 Nov 22;26(53):7432-44. doi: 10.1038/sj.onc.1210552. Epub 2007 May 28. Oncogene. 2007. PMID: 17533364
110 results