Ishida S - Search Results

1

Selective Inhibitor Design for Kinase Homologs Using Multiobjective Monte Carlo Tree Search.

Yoshizawa T, Ishida S, Sato T, Ohta M, Honma T, Terayama K. Yoshizawa T, et al. Among authors: ishida s. J Chem Inf Model. 2022 Nov 28;62(22):5351-5360. doi: 10.1021/acs.jcim.2c00787. Epub 2022 Nov 5. J Chem Inf Model. 2022. PMID: 36334094 Free PMC article.

2

Prediction and Interpretable Visualization of Retrosynthetic Reactions Using Graph Convolutional Networks.

Ishida S, Terayama K, Kojima R, Takasu K, Okuno Y. Ishida S, et al. J Chem Inf Model. 2019 Dec 23;59(12):5026-5033. doi: 10.1021/acs.jcim.9b00538. Epub 2019 Dec 9. J Chem Inf Model. 2019. PMID: 31769668

3

kGCN: a graph-based deep learning framework for chemical structures.

Kojima R, Ishida S, Ohta M, Iwata H, Honma T, Okuno Y. Kojima R, et al. Among authors: ishida s. J Cheminform. 2020 May 12;12(1):32. doi: 10.1186/s13321-020-00435-6. J Cheminform. 2020. PMID: 33430993 Free PMC article.

4

CompRet: a comprehensive recommendation framework for chemical synthesis planning with algorithmic enumeration.

Shibukawa R, Ishida S, Yoshizoe K, Wasa K, Takasu K, Okuno Y, Terayama K, Tsuda K. Shibukawa R, et al. Among authors: ishida s. J Cheminform. 2020 Sep 1;12(1):52. doi: 10.1186/s13321-020-00452-5. J Cheminform. 2020. PMID: 33431005 Free PMC article.

5

AI-Driven Synthetic Route Design Incorporated with Retrosynthesis Knowledge.

Ishida S, Terayama K, Kojima R, Takasu K, Okuno Y. Ishida S, et al. J Chem Inf Model. 2022 Mar 28;62(6):1357-1367. doi: 10.1021/acs.jcim.1c01074. Epub 2022 Mar 8. J Chem Inf Model. 2022. PMID: 35258953 Free PMC article.

6

A Novel Three-Dimensional Imaging System Based on Polysaccharide Staining for Accurate Histopathological Diagnosis of Inflammatory Bowel Diseases.

Nojima S, Ishida S, Terayama K, Matsumoto K, Matsui T, Tahara S, Ohshima K, Kiyokawa H, Kido K, Ukon K, Yoshida SY, Mitani TT, Doki Y, Mizushima T, Okuno Y, Susaki EA, Ueda HR, Morii E. Nojima S, et al. Among authors: ishida s. Cell Mol Gastroenterol Hepatol. 2022;14(4):905-924. doi: 10.1016/j.jcmgh.2022.07.001. Epub 2022 Jul 12. Cell Mol Gastroenterol Hepatol. 2022. PMID: 35835392 Free PMC article.

7

Deep Learning-Based Differential Diagnosis of Follicular Thyroid Tumors Using Histopathological Images.

Nojima S, Kadoi T, Suzuki A, Kato C, Ishida S, Kido K, Fujita K, Okuno Y, Hirokawa M, Terayama K, Morii E. Nojima S, et al. Among authors: ishida s. Mod Pathol. 2023 Nov;36(11):100296. doi: 10.1016/j.modpat.2023.100296. Epub 2023 Jul 31. Mod Pathol. 2023. PMID: 37532181

8

AI-driven molecular generation of not-patented pharmaceutical compounds using world open patent data.

Shimizu Y, Ohta M, Ishida S, Terayama K, Osawa M, Honma T, Ikeda K. Shimizu Y, et al. Among authors: ishida s. J Cheminform. 2023 Dec 13;15(1):120. doi: 10.1186/s13321-023-00791-z. J Cheminform. 2023. PMID: 38093324 Free PMC article.

9

Quantitative analysis of protein dynamics using a deep learning technique combined with experimental cryo-EM density data and MD simulations.

Matsumoto S, Ishida S, Terayama K, Okuno Y. Matsumoto S, et al. Among authors: ishida s. Biophys Physicobiol. 2023 May 16;20(2):e200022. doi: 10.2142/biophysico.bppb-v20.0022. eCollection 2023. Biophys Physicobiol. 2023. PMID: 38496243 Free PMC article.

10

Predicting condensate formation of protein and RNA under various environmental conditions.

Chin KY, Ishida S, Sasaki Y, Terayama K. Chin KY, et al. Among authors: ishida s. BMC Bioinformatics. 2024 Apr 2;25(1):143. doi: 10.1186/s12859-024-05764-z. BMC Bioinformatics. 2024. PMID: 38566033 Free PMC article.

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