Irizarry RA - Search Results

1

Hicks SC, Okrah K, Paulson JN, Quackenbush J, Irizarry RA, Bravo HC. Hicks SC, et al. Among authors: irizarry ra. Biostatistics. 2018 Apr 1;19(2):185-198. doi: 10.1093/biostatistics/kxx028. Biostatistics. 2018. PMID: 29036413 Free PMC article.

2

Exploration, normalization, and summaries of high density oligonucleotide array probe level data.

Irizarry RA, Hobbs B, Collin F, Beazer-Barclay YD, Antonellis KJ, Scherf U, Speed TP. Irizarry RA, et al. Biostatistics. 2003 Apr;4(2):249-64. doi: 10.1093/biostatistics/4.2.249. Biostatistics. 2003. PMID: 12925520

3

Orthologous gene-expression profiling in multi-species models: search for candidate genes.

Grigoryev DN, Ma SF, Irizarry RA, Ye SQ, Quackenbush J, Garcia JG. Grigoryev DN, et al. Among authors: irizarry ra. Genome Biol. 2004;5(5):R34. doi: 10.1186/gb-2004-5-5-r34. Epub 2004 Apr 27. Genome Biol. 2004. PMID: 15128448 Free PMC article.

4

Multiple-laboratory comparison of microarray platforms.

Irizarry RA, Warren D, Spencer F, Kim IF, Biswal S, Frank BC, Gabrielson E, Garcia JG, Geoghegan J, Germino G, Griffin C, Hilmer SC, Hoffman E, Jedlicka AE, Kawasaki E, Martínez-Murillo F, Morsberger L, Lee H, Petersen D, Quackenbush J, Scott A, Wilson M, Yang Y, Ye SQ, Yu W. Irizarry RA, et al. Nat Methods. 2005 May;2(5):345-50. doi: 10.1038/nmeth756. Epub 2005 Apr 21. Nat Methods. 2005. PMID: 15846361 Free article.

5

Response to Shields: 'MIAME, we have a problem'.

Quackenbush J, Irizarry RA. Quackenbush J, et al. Among authors: irizarry ra. Trends Genet. 2006 Sep;22(9):471-2. doi: 10.1016/j.tig.2006.07.007. Epub 2006 Jul 21. Trends Genet. 2006. PMID: 16859802 No abstract available.

6

Exploration, normalization, and genotype calls of high-density oligonucleotide SNP array data.

Carvalho B, Bengtsson H, Speed TP, Irizarry RA. Carvalho B, et al. Among authors: irizarry ra. Biostatistics. 2007 Apr;8(2):485-99. doi: 10.1093/biostatistics/kxl042. Epub 2006 Dec 22. Biostatistics. 2007. PMID: 17189563

7

Model-based quality assessment and base-calling for second-generation sequencing data.

Bravo HC, Irizarry RA. Bravo HC, et al. Among authors: irizarry ra. Biometrics. 2010 Sep;66(3):665-74. doi: 10.1111/j.1541-0420.2009.01353.x. Biometrics. 2010. PMID: 19912177 Free PMC article. Review.

8

Redefining CpG islands using hidden Markov models.

Wu H, Caffo B, Jaffee HA, Irizarry RA, Feinberg AP. Wu H, et al. Among authors: irizarry ra. Biostatistics. 2010 Jul;11(3):499-514. doi: 10.1093/biostatistics/kxq005. Epub 2010 Mar 8. Biostatistics. 2010. PMID: 20212320 Free PMC article.

9

Intensity normalization improves color calling in SOLiD sequencing.

Wu H, Irizarry RA, Bravo HC. Wu H, et al. Among authors: irizarry ra. Nat Methods. 2010 May;7(5):336-7. doi: 10.1038/nmeth0510-336. Nat Methods. 2010. PMID: 20431543 Free PMC article.

10

Tackling the widespread and critical impact of batch effects in high-throughput data.

Leek JT, Scharpf RB, Bravo HC, Simcha D, Langmead B, Johnson WE, Geman D, Baggerly K, Irizarry RA. Leek JT, et al. Among authors: irizarry ra. Nat Rev Genet. 2010 Oct;11(10):733-9. doi: 10.1038/nrg2825. Epub 2010 Sep 14. Nat Rev Genet. 2010. PMID: 20838408 Free PMC article. Review.

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