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Snapper: high-sensitive detection of methylation motifs based on Oxford Nanopore reads.
Konanov DN, Babenko VV, Belova AM, Madan AG, Boldyreva DI, Glushenko OE, Butenko IO, Fedorov DE, Manolov AI, Krivonos DV, Lazarev VN, Govorun VM, Ilina EN. Konanov DN, et al. Among authors: ilina en. Bioinformatics. 2023 Nov 1;39(11):btad702. doi: 10.1093/bioinformatics/btad702. Bioinformatics. 2023. PMID: 37982752 Free PMC article.
Phigaro: high-throughput prophage sequence annotation.
Starikova EV, Tikhonova PO, Prianichnikov NA, Rands CM, Zdobnov EM, Ilina EN, Govorun VM. Starikova EV, et al. Among authors: ilina en. Bioinformatics. 2020 Jun 1;36(12):3882-3884. doi: 10.1093/bioinformatics/btaa250. Bioinformatics. 2020. PMID: 32311023
FunFun: ITS-based functional annotator of fungal communities.
Krivonos DV, Konanov DN, Ilina EN. Krivonos DV, et al. Among authors: ilina en. Ecol Evol. 2023 Mar 8;13(3):e9874. doi: 10.1002/ece3.9874. eCollection 2023 Mar. Ecol Evol. 2023. PMID: 36911300 Free PMC article.
Large scale analysis of amino acid substitutions in bacterial proteomics.
Ischenko D, Alexeev D, Shitikov E, Kanygina A, Malakhova M, Kostryukova E, Larin A, Kovalchuk S, Pobeguts O, Butenko I, Anikanov N, Altukhov I, Ilina E, Govorun V. Ischenko D, et al. BMC Bioinformatics. 2016 Nov 8;17(1):450. doi: 10.1186/s12859-016-1301-5. BMC Bioinformatics. 2016. PMID: 27821049 Free PMC article.
UniqPy: A tool for estimation of short-chain fatty acids composition by gas-chromatography/mass-spectrometry with headspace extraction.
Konanov DN, Zakharzhevskaya NB, Kardonsky DA, Zhgun ES, Kislun YV, Silantyev AS, Shagaleeva OY, Krivonos DV, Troshenkova AN, Govorun VM, Ilina EN. Konanov DN, et al. Among authors: ilina en. J Pharm Biomed Anal. 2022 Apr 1;212:114681. doi: 10.1016/j.jpba.2022.114681. Epub 2022 Feb 19. J Pharm Biomed Anal. 2022. PMID: 35202943
[Intestinal microbiom modulates the response to antitumor immunotherapy].
Olekhnovich EI, Manolov AI, Pavlenko AV, Konanov DN, Fedorov DE, Tikhonova PO, Glushchenko OE, Ilina EN. Olekhnovich EI, et al. Among authors: ilina en. Biomed Khim. 2020 Jan;66(1):54-63. doi: 10.18097/PBMC20206601054. Biomed Khim. 2020. PMID: 32116226 Review. Russian.
Genome analysis of E. coli isolated from Crohn's disease patients.
Rakitina DV, Manolov AI, Kanygina AV, Garushyants SK, Baikova JP, Alexeev DG, Ladygina VG, Kostryukova ES, Larin AK, Semashko TA, Karpova IY, Babenko VV, Ismagilova RK, Malanin SY, Gelfand MS, Ilina EN, Gorodnichev RB, Lisitsyna ES, Aleshkin GI, Scherbakov PL, Khalif IL, Shapina MV, Maev IV, Andreev DN, Govorun VM. Rakitina DV, et al. Among authors: ilina en. BMC Genomics. 2017 Jul 19;18(1):544. doi: 10.1186/s12864-017-3917-x. BMC Genomics. 2017. PMID: 28724357 Free PMC article.
132 results