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Nonlinear machine learning pattern recognition and bacteria-metabolite multilayer network analysis of perturbed gastric microbiome.
Durán C, Ciucci S, Palladini A, Ijaz UZ, Zippo AG, Sterbini FP, Masucci L, Cammarota G, Ianiro G, Spuul P, Schroeder M, Grill SW, Parsons BN, Pritchard DM, Posteraro B, Sanguinetti M, Gasbarrini G, Gasbarrini A, Cannistraci CV. Durán C, et al. Among authors: ijaz uz. Nat Commun. 2021 Mar 26;12(1):1926. doi: 10.1038/s41467-021-22135-x. Nat Commun. 2021. PMID: 33771992 Free PMC article.
Comparison of the human gastric microbiota in hypochlorhydric states arising as a result of Helicobacter pylori-induced atrophic gastritis, autoimmune atrophic gastritis and proton pump inhibitor use.
Parsons BN, Ijaz UZ, D'Amore R, Burkitt MD, Eccles R, Lenzi L, Duckworth CA, Moore AR, Tiszlavicz L, Varro A, Hall N, Pritchard DM. Parsons BN, et al. Among authors: ijaz uz. PLoS Pathog. 2017 Nov 2;13(11):e1006653. doi: 10.1371/journal.ppat.1006653. eCollection 2017 Nov. PLoS Pathog. 2017. PMID: 29095917 Free PMC article.
Binning metagenomic contigs by coverage and composition.
Alneberg J, Bjarnason BS, de Bruijn I, Schirmer M, Quick J, Ijaz UZ, Lahti L, Loman NJ, Andersson AF, Quince C. Alneberg J, et al. Among authors: ijaz uz. Nat Methods. 2014 Nov;11(11):1144-6. doi: 10.1038/nmeth.3103. Epub 2014 Sep 14. Nat Methods. 2014. PMID: 25218180
Bacterial diversity along a 2600 km river continuum.
Savio D, Sinclair L, Ijaz UZ, Parajka J, Reischer GH, Stadler P, Blaschke AP, Blöschl G, Mach RL, Kirschner AK, Farnleitner AH, Eiler A. Savio D, et al. Among authors: ijaz uz. Environ Microbiol. 2015 Dec;17(12):4994-5007. doi: 10.1111/1462-2920.12886. Epub 2015 Jun 11. Environ Microbiol. 2015. PMID: 25922985 Free PMC article.
111 results