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Page 1
Microbiome assembly in thawing permafrost and its feedbacks to climate.
Ernakovich JG, Barbato RA, Rich VI, Schädel C, Hewitt RE, Doherty SJ, Whalen ED, Abbott BW, Barta J, Biasi C, Chabot CL, Hultman J, Knoblauch C, Vetter MCYL, Leewis MC, Liebner S, Mackelprang R, Onstott TC, Richter A, Schütte UME, Siljanen HMP, Taş N, Timling I, Vishnivetskaya TA, Waldrop MP, Winkel M. Ernakovich JG, et al. Among authors: hultman j. Glob Chang Biol. 2022 Sep;28(17):5007-5026. doi: 10.1111/gcb.16231. Epub 2022 Jun 20. Glob Chang Biol. 2022. PMID: 35722720 Free PMC article. Review.
FOAM (Functional Ontology Assignments for Metagenomes): a Hidden Markov Model (HMM) database with environmental focus.
Prestat E, David MM, Hultman J, Taş N, Lamendella R, Dvornik J, Mackelprang R, Myrold DD, Jumpponen A, Tringe SG, Holman E, Mavromatis K, Jansson JK. Prestat E, et al. Among authors: hultman j. Nucleic Acids Res. 2014 Oct 29;42(19):e145. doi: 10.1093/nar/gku702. Epub 2014 Sep 26. Nucleic Acids Res. 2014. PMID: 25260589 Free PMC article.
Multi-omics of permafrost, active layer and thermokarst bog soil microbiomes.
Hultman J, Waldrop MP, Mackelprang R, David MM, McFarland J, Blazewicz SJ, Harden J, Turetsky MR, McGuire AD, Shah MB, VerBerkmoes NC, Lee LH, Mavrommatis K, Jansson JK. Hultman J, et al. Nature. 2015 May 14;521(7551):208-12. doi: 10.1038/nature14238. Epub 2015 Mar 4. Nature. 2015. PMID: 25739499
Metagenome, metatranscriptome and single-cell sequencing reveal microbial response to Deepwater Horizon oil spill.
Mason OU, Hazen TC, Borglin S, Chain PS, Dubinsky EA, Fortney JL, Han J, Holman HY, Hultman J, Lamendella R, Mackelprang R, Malfatti S, Tom LM, Tringe SG, Woyke T, Zhou J, Rubin EM, Jansson JK. Mason OU, et al. Among authors: hultman j. ISME J. 2012 Sep;6(9):1715-27. doi: 10.1038/ismej.2012.59. Epub 2012 Jun 21. ISME J. 2012. PMID: 22717885 Free PMC article.
A communal catalogue reveals Earth's multiscale microbial diversity.
Thompson LR, Sanders JG, McDonald D, Amir A, Ladau J, Locey KJ, Prill RJ, Tripathi A, Gibbons SM, Ackermann G, Navas-Molina JA, Janssen S, Kopylova E, Vázquez-Baeza Y, González A, Morton JT, Mirarab S, Zech Xu Z, Jiang L, Haroon MF, Kanbar J, Zhu Q, Jin Song S, Kosciolek T, Bokulich NA, Lefler J, Brislawn CJ, Humphrey G, Owens SM, Hampton-Marcell J, Berg-Lyons D, McKenzie V, Fierer N, Fuhrman JA, Clauset A, Stevens RL, Shade A, Pollard KS, Goodwin KD, Jansson JK, Gilbert JA, Knight R; Earth Microbiome Project Consortium. Thompson LR, et al. Nature. 2017 Nov 23;551(7681):457-463. doi: 10.1038/nature24621. Epub 2017 Nov 1. Nature. 2017. PMID: 29088705 Free PMC article.
119 results