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Year Number of Results
2020 7
2021 21
2022 31
2023 19
2024 2

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77 results

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Managing and assembling population-scale data streams, tools and workflows to plan for future pandemics within the INFORM-Africa Consortium.
Poongavanan J, Xavier J, Dunaiski M, Tegally H, Oladejo S, Ayorinde O, Wilkinson E, Baxter C, de Oliveira T. Poongavanan J, et al. Among authors: tegally h. S Afr J Sci. 2023 May-Jun;119(5-6):14569. doi: 10.17159/sajs.2023/14659. Epub 2023 May 30. S Afr J Sci. 2023. PMID: 38645941 Free PMC article. No abstract available.
SARS-CoV-2 infection in immunosuppression evolves sub-lineages which independently accumulate neutralization escape mutations.
Lustig G, Ganga Y, Rodel HE, Tegally H, Khairallah A, Jackson L, Cele S, Khan K, Jule Z, Reedoy K, Karim F, Bernstein M, Ndung'u T, Moosa MS, Archary D, de Oliveira T, Lessells R, Neher RA, Abdool Karim SS, Sigal A. Lustig G, et al. Among authors: tegally h. Virus Evol. 2023 Dec 28;10(1):vead075. doi: 10.1093/ve/vead075. eCollection 2024. Virus Evol. 2023. PMID: 38361824 Free PMC article.
An Oxford Nanopore Technology-Based Hepatitis B Virus Sequencing Protocol Suitable For Genomic Surveillance Within Clinical Diagnostic Settings.
Tshiabuila D, Choga W, James SE, Maponga T, Preiser W, van Zyl G, Moir M, van Wyk S, Giandhari J, Pillay S, Anyaneji UJ, Lessells RJ, Naidoo Y, Sanko TJ, Wilkinson E, Tegally H, Baxter C, Martin DP, de Oliveira T. Tshiabuila D, et al. Among authors: tegally h. medRxiv [Preprint]. 2024 Jan 25:2024.01.19.24301519. doi: 10.1101/2024.01.19.24301519. medRxiv. 2024. PMID: 38293032 Free PMC article. Preprint.
An emerging clade of Chikungunya West African genotype discovered in real-time during 2023 outbreak in Senegal.
Padane A, Tegally H, Ramphal Y, Seyni N, Sarr M, Diop MM, Diedhiou CK, Mboup A, Diouf ND, Souaré A, Diagne ND, Aza-Gnandji M, Dabo NA, Dia YA, Diaw NA, Leye N, Diaw PA, Ahouidi A, Cissé B, Diallo AS, Diop O, Diallo AA, Ndoye S, Sanko TJ, Baxter C, Wilkinson E, San JE, Tshabuila D, Naidoo Y, Pillay S, Lessells R, Cissé K, Leye A, Mbaye KA, Kania D, Tinto B, Traoré I, Kagone ST, Ouedraogo AS, Gifford RJ, Lourenço J, Giovanetti M, Giandhari J, de Oliveira T, Mboup S. Padane A, et al. Among authors: tegally h. medRxiv [Preprint]. 2023 Nov 15:2023.11.14.23298527. doi: 10.1101/2023.11.14.23298527. medRxiv. 2023. PMID: 38014099 Free PMC article. Preprint.
Insights into SARS-CoV-2 in Angola during the COVID-19 peak: Molecular epidemiology and genome surveillance.
Francisco NM, van Wyk S, Moir M, San JE, Sebastião CS, Tegally H, Xavier J, Maharaj A, Neto Z, Afonso P, Jandondo D, Paixão J, Miranda J, David K, Inglês L, Pereira A, Paulo A, Carralero RR, Freitas HR, Mufinda F, Lutucuta S, Ghafari M, Giovanetti M, Giandhari J, Pillay S, Naidoo Y, Singh L, Tshiabuila D, Martin DP, Chabuka L, Choga W, Wanjohi D, Mwangi S, Pillay Y, Kebede Y, Shumba E, Ondoa P, Baxter C, Wilkinson E, Tessema SK, Katzourakis A, Lessells R, de Oliveira T, Morais J. Francisco NM, et al. Among authors: tegally h. Influenza Other Respir Viruses. 2023 Sep 22;17(9):e13198. doi: 10.1111/irv.13198. eCollection 2023 Sep. Influenza Other Respir Viruses. 2023. PMID: 37744993 Free PMC article.
Correction: Subramoney et al. Molecular Epidemiology of SARS-CoV-2 during Five COVID-19 Waves and the Significance of Low-Frequency Lineages. Viruses 2023, 15, 1194.
Subramoney K, Mtileni N, Giandhari J, Naidoo Y, Ramphal Y, Pillay S, Ramphal U, Maharaj A, Tshiabuila D, Tegally H, Wilkinson E, Oliveira T, Fielding BC, Treurnicht FK. Subramoney K, et al. Among authors: tegally h. Viruses. 2023 Jul 4;15(7):1502. doi: 10.3390/v15071502. Viruses. 2023. PMID: 37515306 Free PMC article.
Rapid Epidemic Expansion of Chikungunya Virus East/Central/South African Lineage, Paraguay.
Giovanetti M, Vazquez C, Lima M, Castro E, Rojas A, Gomez de la Fuente A, Aquino C, Cantero C, Fleitas F, Torales J, Barrios J, Ortega MJ, Gamarra ML, Villalba S, Alfonzo T, Xavier J, Adelino T, Fritsch H, Iani FCM, Pereira GC, de Oliveira C, Schuab G, Rodrigues ES, Kashima S, Leite J, Gresh L, Franco L, Tegally H, Van Voorhis WC, Lessels R, de Filippis AMB, Ojeda A, Sequera G, Montoya R, Holmes EC, de Oliveira T, Rico JM, Lourenço J, Fonseca V, Alcantara LCJ. Giovanetti M, et al. Among authors: tegally h. Emerg Infect Dis. 2023 Sep;29(9):1859-1863. doi: 10.3201/eid2909.230523. Epub 2023 Jul 25. Emerg Infect Dis. 2023. PMID: 37488810 Free PMC article.
Genomic assessment of invasion dynamics of SARS-CoV-2 Omicron BA.1.
Tsui JL, McCrone JT, Lambert B, Bajaj S, Inward RPD, Bosetti P, Pena RE, Tegally H, Hill V, Zarebski AE, Peacock TP, Liu L, Wu N, Davis M, Bogoch II, Khan K, Kall M, Abdul Aziz NIB, Colquhoun R, O'Toole Á, Jackson B, Dasgupta A, Wilkinson E, de Oliveira T; COVID-19 Genomics UK (COG-UK) consortium¶; Connor TR, Loman NJ, Colizza V, Fraser C, Volz E, Ji X, Gutierrez B, Chand M, Dellicour S, Cauchemez S, Raghwani J, Suchard MA, Lemey P, Rambaut A, Pybus OG, Kraemer MUG. Tsui JL, et al. Among authors: tegally h. Science. 2023 Jul 21;381(6655):336-343. doi: 10.1126/science.adg6605. Epub 2023 Jul 20. Science. 2023. PMID: 37471538 Free PMC article.
Dispersal patterns and influence of air travel during the global expansion of SARS-CoV-2 variants of concern.
Tegally H, Wilkinson E, Tsui JL, Moir M, Martin D, Brito AF, Giovanetti M, Khan K, Huber C, Bogoch II, San JE, Poongavanan J, Xavier JS, Candido DDS, Romero F, Baxter C, Pybus OG, Lessells RJ, Faria NR, Kraemer MUG, de Oliveira T. Tegally H, et al. Cell. 2023 Jul 20;186(15):3277-3290.e16. doi: 10.1016/j.cell.2023.06.001. Epub 2023 Jun 7. Cell. 2023. PMID: 37413988 Free PMC article.
77 results