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On the synthesis of DNA error correcting codes.
Biosystems. 2012 Oct;110(1):1-8. doi: 10.1016/j.biosystems.2012.06.005. Epub 2012 Jul 6.
Biosystems. 2012.
PMID: 22771982
Genetic algorithm with alternating selection pressure for protein side-chain packing and pK(a) prediction.
Comte P, Vassiliev S, Houghten S, Bruce D.
Comte P, et al.
Biosystems. 2011 Sep;105(3):263-70. doi: 10.1016/j.biosystems.2011.05.013. Epub 2011 Jun 6.
Biosystems. 2011.
PMID: 21672605
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Restarting and recentering genetic algorithm variations for DNA fragment assembly: The necessity of a multi-strategy approach.
Hughes JA, Houghten S, Ashlock D.
Hughes JA, et al.
Biosystems. 2016 Dec;150:35-45. doi: 10.1016/j.biosystems.2016.08.001. Epub 2016 Aug 10.
Biosystems. 2016.
PMID: 27521768
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Models of Parkinson's Disease Patient Gait.
Hughes JA, Houghten S, Brown JA.
Hughes JA, et al.
IEEE J Biomed Health Inform. 2020 Nov;24(11):3103-3110. doi: 10.1109/JBHI.2019.2961808. Epub 2020 Nov 6.
IEEE J Biomed Health Inform. 2020.
PMID: 31871002
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Effective decoders for DNA codes.
Houghten S, Banik S.
Houghten S, et al.
Biosystems. 2022 Jan;211:104583. doi: 10.1016/j.biosystems.2021.104583. Epub 2021 Dec 2.
Biosystems. 2022.
PMID: 34863885
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All lockdowns are not equal: Reducing epidemic impact through evolutionary computation.
Sargant J, Dubé M, Houghten S.
Sargant J, et al.
Biosystems. 2023 Aug;230:104935. doi: 10.1016/j.biosystems.2023.104935. Epub 2023 Jun 2.
Biosystems. 2023.
PMID: 37269899
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A centrality based multi-objective approach to disease gene association.
Collins TK, Houghten S.
Collins TK, et al.
Biosystems. 2020 Jun;193-194:104133. doi: 10.1016/j.biosystems.2020.104133. Epub 2020 Mar 31.
Biosystems. 2020.
PMID: 32243908
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Lossy Compression of Quality Values in Sequencing Data.
Morales VS, Houghten S.
Morales VS, et al.
IEEE/ACM Trans Comput Biol Bioinform. 2021 Sep-Oct;18(5):1958-1969. doi: 10.1109/TCBB.2019.2959273. Epub 2021 Oct 7.
IEEE/ACM Trans Comput Biol Bioinform. 2021.
PMID: 31869798
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