Hooyberghs J - Search Results

1

Designing biomedical proteomics experiments: state-of-the-art and future perspectives.

Maes E, Kelchtermans P, Bittremieux W, De Grave K, Degroeve S, Hooyberghs J, Mertens I, Baggerman G, Ramon J, Laukens K, Martens L, Valkenborg D. Maes E, et al. Among authors: hooyberghs j. Expert Rev Proteomics. 2016 May;13(5):495-511. doi: 10.1586/14789450.2016.1172967. Epub 2016 Apr 25. Expert Rev Proteomics. 2016. PMID: 27031651 Review.

2

CONSTANd : A Normalization Method for Isobaric Labeled Spectra by Constrained Optimization.

Maes E, Hadiwikarta WW, Mertens I, Baggerman G, Hooyberghs J, Valkenborg D. Maes E, et al. Among authors: hooyberghs j. Mol Cell Proteomics. 2016 Aug;15(8):2779-90. doi: 10.1074/mcp.M115.056911. Epub 2016 Jun 14. Mol Cell Proteomics. 2016. PMID: 27302888 Free PMC article.

3

Thermodynamic framework to assess low abundance DNA mutation detection by hybridization.

Willems H, Jacobs A, Hadiwikarta WW, Venken T, Valkenborg D, Van Roy N, Vandesompele J, Hooyberghs J. Willems H, et al. Among authors: hooyberghs j. PLoS One. 2017 May 25;12(5):e0177384. doi: 10.1371/journal.pone.0177384. eCollection 2017. PLoS One. 2017. PMID: 28542229 Free PMC article.

4

QCQuan: A Web Tool for the Automated Assessment of Protein Expression and Data Quality of Labeled Mass Spectrometry Experiments.

Van Houtven J, Agten A, Boonen K, Baggerman G, Hooyberghs J, Laukens K, Valkenborg D. Van Houtven J, et al. Among authors: hooyberghs j. J Proteome Res. 2019 May 3;18(5):2221-2227. doi: 10.1021/acs.jproteome.9b00072. Epub 2019 Apr 11. J Proteome Res. 2019. PMID: 30942071

5

MIND: A Double-Linear Model To Accurately Determine Monoisotopic Precursor Mass in High-Resolution Top-Down Proteomics.

Lermyte F, Dittwald P, Claesen J, Baggerman G, Sobott F, O'Connor PB, Laukens K, Hooyberghs J, Gambin A, Valkenborg D. Lermyte F, et al. Among authors: hooyberghs j. Anal Chem. 2019 Aug 6;91(15):10310-10319. doi: 10.1021/acs.analchem.9b02682. Epub 2019 Jul 23. Anal Chem. 2019. PMID: 31283196 Free article.

6

PRiSM: A prototype for exhaustive, restriction-free database searching for mass spectrometry-based identification.

Van Houtven J, Boonen K, Baggerman G, Askenazi M, Laukens K, Hooyberghs J, Valkenborg D. Van Houtven J, et al. Among authors: hooyberghs j. Rapid Commun Mass Spectrom. 2020 Oct 2:e8962. doi: 10.1002/rcm.8962. Online ahead of print. Rapid Commun Mass Spectrom. 2020. PMID: 33009686

7

CONSTANd: An Efficient Normalization Method for Relative Quantification in Small- and Large-Scale Omics Experiments in R BioConductor and Python.

Van Houtven J, Hooyberghs J, Laukens K, Valkenborg D. Van Houtven J, et al. Among authors: hooyberghs j. J Proteome Res. 2021 Apr 2;20(4):2151-2156. doi: 10.1021/acs.jproteome.0c00977. Epub 2021 Mar 11. J Proteome Res. 2021. PMID: 33703904

8

Constrained Standardization of Count Data from Massive Parallel Sequencing.

Van Houtven J, Cuypers B, Meysman P, Hooyberghs J, Laukens K, Valkenborg D. Van Houtven J, et al. Among authors: hooyberghs j. J Mol Biol. 2021 May 28;433(11):166966. doi: 10.1016/j.jmb.2021.166966. Epub 2021 Mar 29. J Mol Biol. 2021. PMID: 33794260

9

Towards Building a Quantitative Proteomics Toolbox in Precision Medicine: A Mini-Review.

Correa Rojo A, Heylen D, Aerts J, Thas O, Hooyberghs J, Ertaylan G, Valkenborg D. Correa Rojo A, et al. Among authors: hooyberghs j. Front Physiol. 2021 Aug 26;12:723510. doi: 10.3389/fphys.2021.723510. eCollection 2021. Front Physiol. 2021. PMID: 34512391 Free PMC article. Review.

10

A new approach to study exhaled proteins as potential biomarkers for asthma.

Bloemen K, Van Den Heuvel R, Govarts E, Hooyberghs J, Nelen V, Witters E, Desager K, Schoeters G. Bloemen K, et al. Among authors: hooyberghs j. Clin Exp Allergy. 2011 Mar;41(3):346-56. doi: 10.1111/j.1365-2222.2010.03638.x. Epub 2010 Nov 24. Clin Exp Allergy. 2011. PMID: 21105917

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