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Page 1
ePlatypus: an ecosystem for computational analysis of immunogenomics data.
Cotet TS, Agrafiotis A, Kreiner V, Kuhn R, Shlesinger D, Manero-Carranza M, Khodaverdi K, Kladis E, Desideri Perea A, Maassen-Veeters D, Glänzer W, Massery S, Guerci L, Hong KL, Han J, Stiklioraitis K, D'Arcy VM, Dizerens R, Kilchenmann S, Stalder L, Nissen L, Vogelsanger B, Anzböck S, Laslo D, Bakker S, Kondorosy M, Venerito M, Sanz García A, Feller I, Oxenius A, Reddy ST, Yermanos A. Cotet TS, et al. Among authors: hong kl. Bioinformatics. 2023 Sep 2;39(9):btad553. doi: 10.1093/bioinformatics/btad553. Bioinformatics. 2023. PMID: 37682115 Free PMC article.
Generation of a single-cell B cell atlas of antibody repertoires and transcriptomes to identify signatures associated with antigen specificity.
Agrafiotis A, Neumeier D, Hong KL, Chowdhury T, Ehling R, Kuhn R, Sandu I, Kreiner V, Cotet TS, Shlesinger D, Laslo D, Anzböck S, Starkie D, Lightwood DJ, Oxenius A, Reddy ST, Yermanos A. Agrafiotis A, et al. Among authors: hong kl. iScience. 2023 Jan 25;26(3):106055. doi: 10.1016/j.isci.2023.106055. eCollection 2023 Mar 17. iScience. 2023. PMID: 36852274 Free PMC article.
Persistent virus-specific and clonally expanded antibody-secreting cells respond to induced self-antigen in the CNS.
Agrafiotis A, Dizerens R, Vincenti I, Wagner I, Kuhn R, Shlesinger D, Manero-Carranza M, Cotet TS, Hong KL, Page N, Fonta N, Shammas G, Mariotte A, Piccinno M, Kreutzfeldt M, Gruntz B, Ehling R, Genovese A, Pedrioli A, Dounas A, Franzenburg S, Tumani H, Kümpfel T, Kavaka V, Gerdes LA, Dornmair K, Beltrán E, Oxenius A, Reddy ST, Merkler D, Yermanos A. Agrafiotis A, et al. Among authors: hong kl. Acta Neuropathol. 2023 Mar;145(3):335-355. doi: 10.1007/s00401-023-02537-5. Epub 2023 Jan 25. Acta Neuropathol. 2023. PMID: 36695896 Free PMC article.
High-throughput T cell receptor engineering by functional screening identifies candidates with enhanced potency and specificity.
Vazquez-Lombardi R, Jung JS, Schlatter FS, Mei A, Mantuano NR, Bieberich F, Hong KL, Kucharczyk J, Kapetanovic E, Aznauryan E, Weber CR, Zippelius A, Läubli H, Reddy ST. Vazquez-Lombardi R, et al. Among authors: hong kl. Immunity. 2022 Oct 11;55(10):1953-1966.e10. doi: 10.1016/j.immuni.2022.09.004. Epub 2022 Sep 28. Immunity. 2022. PMID: 36174557 Free article.
Single-cell immune repertoire sequencing of B and T cells in murine models of infection and autoimmunity.
Shlesinger D, Hong KL, Shammas G, Page N, Sandu I, Agrafiotis A, Kreiner V, Fonta N, Vincenti I, Wagner I, Piccinno M, Mariotte A, Klimek B, Dizerens R, Manero-Carranza M, Kuhn R, Ehling R, Frei L, Khodaverdi K, Panetti C, Joller N, Oxenius A, Merkler D, Reddy ST, Yermanos A. Shlesinger D, et al. Among authors: hong kl. Genes Immun. 2022 Sep;23(6):183-195. doi: 10.1038/s41435-022-00180-w. Epub 2022 Aug 26. Genes Immun. 2022. PMID: 36028771 Free PMC article.
57 results