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Genome-scale rates of evolutionary change in bacteria.
Duchêne S, Holt KE, Weill FX, Le Hello S, Hawkey J, Edwards DJ, Fourment M, Holmes EC. Duchêne S, et al. Among authors: holmes ec. Microb Genom. 2016 Nov 30;2(11):e000094. doi: 10.1099/mgen.0.000094. eCollection 2016 Nov. Microb Genom. 2016. PMID: 28348834 Free PMC article.
Shigella sonnei genome sequencing and phylogenetic analysis indicate recent global dissemination from Europe.
Holt KE, Baker S, Weill FX, Holmes EC, Kitchen A, Yu J, Sangal V, Brown DJ, Coia JE, Kim DW, Choi SY, Kim SH, da Silveira WD, Pickard DJ, Farrar JJ, Parkhill J, Dougan G, Thomson NR. Holt KE, et al. Among authors: holmes ec. Nat Genet. 2012 Sep;44(9):1056-9. doi: 10.1038/ng.2369. Epub 2012 Aug 5. Nat Genet. 2012. PMID: 22863732 Free PMC article.
Yersinia pestis and the plague of Justinian 541-543 AD: a genomic analysis.
Wagner DM, Klunk J, Harbeck M, Devault A, Waglechner N, Sahl JW, Enk J, Birdsell DN, Kuch M, Lumibao C, Poinar D, Pearson T, Fourment M, Golding B, Riehm JM, Earn DJ, Dewitte S, Rouillard JM, Grupe G, Wiechmann I, Bliska JB, Keim PS, Scholz HC, Holmes EC, Poinar H. Wagner DM, et al. Among authors: holmes ec. Lancet Infect Dis. 2014 Apr;14(4):319-26. doi: 10.1016/S1473-3099(13)70323-2. Epub 2014 Jan 28. Lancet Infect Dis. 2014. PMID: 24480148
The contrasting phylodynamics of human influenza B viruses.
Vijaykrishna D, Holmes EC, Joseph U, Fourment M, Su YC, Halpin R, Lee RT, Deng YM, Gunalan V, Lin X, Stockwell TB, Fedorova NB, Zhou B, Spirason N, Kühnert D, Bošková V, Stadler T, Costa AM, Dwyer DE, Huang QS, Jennings LC, Rawlinson W, Sullivan SG, Hurt AC, Maurer-Stroh S, Wentworth DE, Smith GJ, Barr IG. Vijaykrishna D, et al. Among authors: holmes ec. Elife. 2015 Jan 16;4:e05055. doi: 10.7554/eLife.05055. Elife. 2015. PMID: 25594904 Free PMC article.
939 results