Holding D - Search Results

1

InMut-finder: a software tool for insertion identification in mutagenesis using Nanopore long reads.

Song R, Wang Z, Wang H, Zhang H, Wang X, Nguyen H, Holding D, Yu B, Clemente T, Jia S, Zhang C. Song R, et al. Among authors: holding d. BMC Genomics. 2021 Dec 19;22(1):908. doi: 10.1186/s12864-021-08206-9. BMC Genomics. 2021. PMID: 34923956 Free PMC article.

2

Sequence-indexed mutations in maize using the UniformMu transposon-tagging population.

Settles AM, Holding DR, Tan BC, Latshaw SP, Liu J, Suzuki M, Li L, O'Brien BA, Fajardo DS, Wroclawska E, Tseung CW, Lai J, Hunter CT 3rd, Avigne WT, Baier J, Messing J, Hannah LC, Koch KE, Becraft PW, Larkins BA, McCarty DR. Settles AM, et al. BMC Genomics. 2007 May 9;8:116. doi: 10.1186/1471-2164-8-116. BMC Genomics. 2007. PMID: 17490480 Free PMC article.

3

Pyrophosphate-dependent fructose-6-phosphate 1-phosphotransferase induction and attenuation of Hsp gene expression during endosperm modification in quality protein maize.

Guo X, Ronhovde K, Yuan L, Yao B, Soundararajan MP, Elthon T, Zhang C, Holding DR. Guo X, et al. Plant Physiol. 2012 Feb;158(2):917-29. doi: 10.1104/pp.111.191163. Epub 2011 Dec 8. Plant Physiol. 2012. PMID: 22158678 Free PMC article.

4

Deletion mutagenesis identifies a haploinsufficient role for γ-zein in opaque2 endosperm modification.

Yuan L, Dou Y, Kianian SF, Zhang C, Holding DR. Yuan L, et al. Plant Physiol. 2014 Jan;164(1):119-30. doi: 10.1104/pp.113.230961. Epub 2013 Nov 8. Plant Physiol. 2014. PMID: 24214534 Free PMC article.

5

Identification of differentially expressed genes between sorghum genotypes with contrasting nitrogen stress tolerance by genome-wide transcriptional profiling.

Gelli M, Duo Y, Konda AR, Zhang C, Holding D, Dweikat I. Gelli M, et al. Among authors: holding d. BMC Genomics. 2014 Mar 5;15:179. doi: 10.1186/1471-2164-15-179. BMC Genomics. 2014. PMID: 24597475 Free PMC article.

6

Differential Expression Analysis in RNA-Seq by a Naive Bayes Classifier with Local Normalization.

Dou Y, Guo X, Yuan L, Holding DR, Zhang C. Dou Y, et al. Biomed Res Int. 2015;2015:789516. doi: 10.1155/2015/789516. Epub 2015 Aug 3. Biomed Res Int. 2015. PMID: 26339642 Free PMC article.

7

Proteomic profiling of maize opaque endosperm mutants reveals selective accumulation of lysine-enriched proteins.

Morton KJ, Jia S, Zhang C, Holding DR. Morton KJ, et al. J Exp Bot. 2016 Mar;67(5):1381-96. doi: 10.1093/jxb/erv532. Epub 2015 Dec 27. J Exp Bot. 2016. PMID: 26712829 Free PMC article.

8

Mapping QTLs and association of differentially expressed gene transcripts for multiple agronomic traits under different nitrogen levels in sorghum.

Gelli M, Mitchell SE, Liu K, Clemente TE, Weeks DP, Zhang C, Holding DR, Dweikat IM. Gelli M, et al. BMC Plant Biol. 2016 Jan 13;16:16. doi: 10.1186/s12870-015-0696-x. BMC Plant Biol. 2016. PMID: 26759170 Free PMC article.

9

A Population of Deletion Mutants and an Integrated Mapping and Exome-seq Pipeline for Gene Discovery in Maize.

Jia S, Li A, Morton K, Avoles-Kianian P, Kianian SF, Zhang C, Holding D. Jia S, et al. Among authors: holding d. G3 (Bethesda). 2016 Aug 9;6(8):2385-95. doi: 10.1534/g3.116.030528. G3 (Bethesda). 2016. PMID: 27261000 Free PMC article.

10

Validation of QTL mapping and transcriptome profiling for identification of candidate genes associated with nitrogen stress tolerance in sorghum.

Gelli M, Konda AR, Liu K, Zhang C, Clemente TE, Holding DR, Dweikat IM. Gelli M, et al. BMC Plant Biol. 2017 Jul 11;17(1):123. doi: 10.1186/s12870-017-1064-9. BMC Plant Biol. 2017. PMID: 28697783 Free PMC article.

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