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Genomic characterization of lytic bacteriophages targeting genetically diverse Pseudomonas aeruginosa clinical isolates.
Nordstrom HR, Evans DR, Finney AG, Westbrook KJ, Zamora PF, Hofstaedter CE, Yassin MH, Pradhan A, Iovleva A, Ernst RK, Bomberger JM, Shields RK, Doi Y, Van Tyne D. Nordstrom HR, et al. Among authors: hofstaedter ce. iScience. 2022 May 10;25(6):104372. doi: 10.1016/j.isci.2022.104372. eCollection 2022 Jun 17. iScience. 2022. PMID: 35620437 Free PMC article.
An acquired acyltransferase promotes Klebsiella pneumoniae ST258 respiratory infection.
Ahn D, Bhushan G, McConville TH, Annavajhala MK, Soni RK, Wong Fok Lung T, Hofstaedter CE, Shah SS, Chong AM, Castano VG, Ernst RK, Uhlemann AC, Prince A. Ahn D, et al. Among authors: hofstaedter ce. Cell Rep. 2021 Jun 1;35(9):109196. doi: 10.1016/j.celrep.2021.109196. Cell Rep. 2021. PMID: 34077733 Free PMC article.
Klebsiella pneumoniae induces host metabolic stress that promotes tolerance to pulmonary infection.
Wong Fok Lung T, Charytonowicz D, Beaumont KG, Shah SS, Sridhar SH, Gorrie CL, Mu A, Hofstaedter CE, Varisco D, McConville TH, Drikic M, Fowler B, Urso A, Shi W, Fucich D, Annavajhala MK, Khan IN, Oussenko I, Francoeur N, Smith ML, Stockwell BR, Lewis IA, Hachani A, Upadhyay Baskota S, Uhlemann AC, Ahn D, Ernst RK, Howden BP, Sebra R, Prince A. Wong Fok Lung T, et al. Among authors: hofstaedter ce. Cell Metab. 2022 May 3;34(5):761-774.e9. doi: 10.1016/j.cmet.2022.03.009. Epub 2022 Apr 11. Cell Metab. 2022. PMID: 35413274 Free PMC article.
Whole-Genome Sequencing To Identify Drivers of Carbapenem-Resistant Klebsiella pneumoniae Transmission within and between Regional Long-Term Acute-Care Hospitals.
Han JH, Lapp Z, Bushman F, Lautenbach E, Goldstein EJC, Mattei L, Hofstaedter CE, Kim D, Nachamkin I, Garrigan C, Jain T, Bilker W, Wolford HM, Slayton RB, Wise J, Tolomeo P, Snitkin ES. Han JH, et al. Among authors: hofstaedter ce. Antimicrob Agents Chemother. 2019 Oct 22;63(11):e01622-19. doi: 10.1128/AAC.01622-19. Print 2019 Nov. Antimicrob Agents Chemother. 2019. PMID: 31451495 Free PMC article.
Optimizing methods and dodging pitfalls in microbiome research.
Kim D, Hofstaedter CE, Zhao C, Mattei L, Tanes C, Clarke E, Lauder A, Sherrill-Mix S, Chehoud C, Kelsen J, Conrad M, Collman RG, Baldassano R, Bushman FD, Bittinger K. Kim D, et al. Among authors: hofstaedter ce. Microbiome. 2017 May 5;5(1):52. doi: 10.1186/s40168-017-0267-5. Microbiome. 2017. PMID: 28476139 Free PMC article. Review.
Microbial Lineages in Sarcoidosis. A Metagenomic Analysis Tailored for Low-Microbial Content Samples.
Clarke EL, Lauder AP, Hofstaedter CE, Hwang Y, Fitzgerald AS, Imai I, Biernat W, Rękawiecki B, Majewska H, Dubaniewicz A, Litzky LA, Feldman MD, Bittinger K, Rossman MD, Patterson KC, Bushman FD, Collman RG. Clarke EL, et al. Among authors: hofstaedter ce. Am J Respir Crit Care Med. 2018 Jan 15;197(2):225-234. doi: 10.1164/rccm.201705-0891OC. Am J Respir Crit Care Med. 2018. PMID: 28846439 Free PMC article.
21 results