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Accurate mapping of tRNA reads.
Hoffmann A, Fallmann J, Vilardo E, Mörl M, Stadler PF, Amman F. Hoffmann A, et al. Bioinformatics. 2018 Apr 1;34(7):1116-1124. doi: 10.1093/bioinformatics/btx756. Bioinformatics. 2018. PMID: 29228294
Orthologs, turn-over, and remolding of tRNAs in primates and fruit flies.
Velandia-Huerto CA, Berkemer SJ, Hoffmann A, Retzlaff N, Romero Marroquín LC, Hernández-Rosales M, Stadler PF, Bermúdez-Santana CI. Velandia-Huerto CA, et al. Among authors: hoffmann a. BMC Genomics. 2016 Aug 11;17(1):617. doi: 10.1186/s12864-016-2927-4. BMC Genomics. 2016. PMID: 27515907 Free PMC article.
SMORE: Synteny Modulator of Repetitive Elements.
Berkemer SJ, Hoffmann A, Murray CRA, Stadler PF. Berkemer SJ, et al. Among authors: hoffmann a. Life (Basel). 2017 Oct 31;7(4):42. doi: 10.3390/life7040042. Life (Basel). 2017. PMID: 29088079 Free PMC article.
Accurate mapping of tRNA reads.
Hoffmann A, Fallmann J, Vilardo E, Mörl M, Stadler PF, Amman F. Hoffmann A, et al. Bioinformatics. 2018 Jul 1;34(13):2339. doi: 10.1093/bioinformatics/bty118. Bioinformatics. 2018. PMID: 29547898 No abstract available.
Intronic tRNAs of mitochondrial origin regulate constitutive and alternative splicing.
Hoser SM, Hoffmann A, Meindl A, Gamper M, Fallmann J, Bernhart SH, Müller L, Ploner M, Misslinger M, Kremser L, Lindner H, Geley S, Schaal H, Stadler PF, Huettenhofer A. Hoser SM, et al. Among authors: hoffmann a. Genome Biol. 2020 Dec 8;21(1):299. doi: 10.1186/s13059-020-02199-6. Genome Biol. 2020. PMID: 33292386 Free PMC article.
Binding of NUFIP2 to Roquin promotes recognition and regulation of ICOS mRNA.
Rehage N, Davydova E, Conrad C, Behrens G, Maiser A, Stehklein JE, Brenner S, Klein J, Jeridi A, Hoffmann A, Lee E, Dianzani U, Willemsen R, Feederle R, Reiche K, Hackermüller J, Leonhardt H, Sharma S, Niessing D, Heissmeyer V. Rehage N, et al. Among authors: hoffmann a. Nat Commun. 2018 Jan 19;9(1):299. doi: 10.1038/s41467-017-02582-1. Nat Commun. 2018. PMID: 29352114 Free PMC article.
2,665 results