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GA4GH: International policies and standards for data sharing across genomic research and healthcare.
Rehm HL, Page AJH, Smith L, Adams JB, Alterovitz G, Babb LJ, Barkley MP, Baudis M, Beauvais MJS, Beck T, Beckmann JS, Beltran S, Bernick D, Bernier A, Bonfield JK, Boughtwood TF, Bourque G, Bowers SR, Brookes AJ, Brudno M, Brush MH, Bujold D, Burdett T, Buske OJ, Cabili MN, Cameron DL, Carroll RJ, Casas-Silva E, Chakravarty D, Chaudhari BP, Chen SH, Cherry JM, Chung J, Cline M, Clissold HL, Cook-Deegan RM, Courtot M, Cunningham F, Cupak M, Davies RM, Denisko D, Doerr MJ, Dolman LI, Dove ES, Dursi LJ, Dyke SOM, Eddy JA, Eilbeck K, Ellrott KP, Fairley S, Fakhro KA, Firth HV, Fitzsimons MS, Fiume M, Flicek P, Fore IM, Freeberg MA, Freimuth RR, Fromont LA, Fuerth J, Gaff CL, Gan W, Ghanaim EM, Glazer D, Green RC, Griffith M, Griffith OL, Grossman RL, Groza T, Auvil JMG, Guigó R, Gupta D, Haendel MA, Hamosh A, Hansen DP, Hart RK, Hartley DM, Haussler D, Hendricks-Sturrup RM, Ho CWL, Hobb AE, Hoffman MM, Hofmann OM, Holub P, Hsu JS, Hubaux JP, Hunt SE, Husami A, Jacobsen JO, Jamuar SS, Janes EL, Jeanson F, Jené A, Johns AL, Joly Y, Jones SJM, Kanitz A, Kato K, Keane TM, Kekesi-Lafrance K, Kelleher J, Kerry G, Khor SS, Knoppers BM, Konopko MA, Kosaki K, Kuba M, Lawson J, Leinonen … See abstract for full author list ➔ Rehm HL, et al. Among authors: hoffman mm. Cell Genom. 2021 Nov 10;1(2):100029. doi: 10.1016/j.xgen.2021.100029. Cell Genom. 2021. PMID: 35072136 Free PMC article.
Exploratory analysis of genomic segmentations with Segtools.
Buske OJ, Hoffman MM, Ponts N, Le Roch KG, Noble WS. Buske OJ, et al. Among authors: hoffman mm. BMC Bioinformatics. 2011 Oct 26;12:415. doi: 10.1186/1471-2105-12-415. BMC Bioinformatics. 2011. PMID: 22029426 Free PMC article.
Determining the epigenome using DNA alone.
Viner C, Hoffman MM. Viner C, et al. Among authors: hoffman mm. Nat Methods. 2015 Mar;12(3):191-2. doi: 10.1038/nmeth.3291. Nat Methods. 2015. PMID: 25719827 No abstract available.
Classification and interaction in random forests.
Denisko D, Hoffman MM. Denisko D, et al. Among authors: hoffman mm. Proc Natl Acad Sci U S A. 2018 Feb 20;115(8):1690-1692. doi: 10.1073/pnas.1800256115. Epub 2018 Feb 12. Proc Natl Acad Sci U S A. 2018. PMID: 29440440 Free PMC article. No abstract available.
DNAmod: the DNA modification database.
Sood AJ, Viner C, Hoffman MM. Sood AJ, et al. Among authors: hoffman mm. J Cheminform. 2019 Apr 23;11(1):30. doi: 10.1186/s13321-019-0349-4. J Cheminform. 2019. PMID: 31016417 Free PMC article.
Sharing biological data: why, when, and how.
Wilson SL, Way GP, Bittremieux W, Armache JP, Haendel MA, Hoffman MM. Wilson SL, et al. Among authors: hoffman mm. FEBS Lett. 2021 Apr;595(7):847-863. doi: 10.1002/1873-3468.14067. FEBS Lett. 2021. PMID: 33843054 Free PMC article.
113 results