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Wastewater sequencing reveals community and variant dynamics of the collective human virome.
Tisza M, Javornik Cregeen S, Avadhanula V, Zhang P, Ayvaz T, Feliz K, Hoffman KL, Clark JR, Terwilliger A, Ross MC, Cormier J, Moreno H, Wang L, Payne K, Henke D, Troisi C, Wu F, Rios J, Deegan J, Hansen B, Balliew J, Gitter A, Zhang K, Li R, Bauer CX, Mena KD, Piedra PA, Petrosino JF, Boerwinkle E, Maresso AW. Tisza M, et al. Among authors: hoffman kl. Nat Commun. 2023 Oct 28;14(1):6878. doi: 10.1038/s41467-023-42064-1. Nat Commun. 2023. PMID: 37898601 Free PMC article.
Oral microbiota reveals signs of acculturation in Mexican American women.
Hoffman KL, Hutchinson DS, Fowler J, Smith DP, Ajami NJ, Zhao H, Scheet P, Chow WH, Petrosino JF, Daniel CR. Hoffman KL, et al. PLoS One. 2018 Apr 25;13(4):e0194100. doi: 10.1371/journal.pone.0194100. eCollection 2018. PLoS One. 2018. PMID: 29694348 Free PMC article.
The BE GONE trial study protocol: a randomized crossover dietary intervention of dry beans targeting the gut microbiome of overweight and obese patients with a history of colorectal polyps or cancer.
Zhang X, Browman G, Siu W, Basen-Engquist KM, Hanash SM, Hoffman KL, Okhuysen PC, Scheet P, Petrosino JF, Kopetz S, Daniel CR. Zhang X, et al. Among authors: hoffman kl. BMC Cancer. 2019 Dec 18;19(1):1233. doi: 10.1186/s12885-019-6400-z. BMC Cancer. 2019. PMID: 31852462 Free PMC article.
Rationale, design and baseline characteristics of the Microbiome and Insulin Longitudinal Evaluation Study (MILES).
Jensen ET, Bertoni AG, Crago OL, Hoffman KL, Wood AC, Arzumanyan Z, Lam LK, Roll K, Sandow K, Wu M, Rich SS, Rotter JI, Chen YI, Petrosino JF, Goodarzi MO. Jensen ET, et al. Among authors: hoffman kl. Diabetes Obes Metab. 2020 Nov;22(11):1976-1984. doi: 10.1111/dom.14145. Epub 2020 Aug 20. Diabetes Obes Metab. 2020. PMID: 32687239 Free PMC article.
Oligonucleotide capture sequencing of the SARS-CoV-2 genome and subgenomic fragments from COVID-19 individuals.
Doddapaneni H, Cregeen SJ, Sucgang R, Meng Q, Qin X, Avadhanula V, Chao H, Menon V, Nicholson E, Henke D, Piedra FA, Rajan A, Momin Z, Kottapalli K, Hoffman KL, Sedlazeck FJ, Metcalf G, Piedra PA, Muzny DM, Petrosino JF, Gibbs RA. Doddapaneni H, et al. Among authors: hoffman kl. bioRxiv [Preprint]. 2020 Jul 27:2020.07.27.223495. doi: 10.1101/2020.07.27.223495. bioRxiv. 2020. PMID: 32766579 Free PMC article. Updated. Preprint.
Impact of Diabetes on the Gut and Salivary IgA Microbiomes.
Brown EL, Essigmann HT, Hoffman KL, Palm NW, Gunter SM, Sederstrom JM, Petrosino JF, Jun G, Aguilar D, Perkison WB, Hanis CL, DuPont HL. Brown EL, et al. Among authors: hoffman kl. Infect Immun. 2020 Nov 16;88(12):e00301-20. doi: 10.1128/IAI.00301-20. Print 2020 Nov 16. Infect Immun. 2020. PMID: 32900816 Free PMC article.
208 results