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CARD 2023: expanded curation, support for machine learning, and resistome prediction at the Comprehensive Antibiotic Resistance Database.
Nucleic Acids Res. 2023 Jan 6;51(D1):D690-D699. doi: 10.1093/nar/gkac920.
Nucleic Acids Res. 2023.
PMID: 36263822
Free PMC article.
Enabling genomic island prediction and comparison in multiple genomes to investigate bacterial evolution and outbreaks.
Bertelli C, Gray KL, Woods N, Lim AC, Tilley KE, Winsor GL, Hoad GR, Roudgar A, Spencer A, Peltier J, Warren D, Raphenya AR, McArthur AG, Brinkman FSL.
Bertelli C, et al. Among authors: hoad gr.
Microb Genom. 2022 May;8(5):mgen000818. doi: 10.1099/mgen.0.000818.
Microb Genom. 2022.
PMID: 35584003
Free PMC article.
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PSORTdb 4.0: expanded and redesigned bacterial and archaeal protein subcellular localization database incorporating new secondary localizations.
Lau WYV, Hoad GR, Jin V, Winsor GL, Madyan A, Gray KL, Laird MR, Lo R, Brinkman FSL.
Lau WYV, et al. Among authors: hoad gr.
Nucleic Acids Res. 2021 Jan 8;49(D1):D803-D808. doi: 10.1093/nar/gkaa1095.
Nucleic Acids Res. 2021.
PMID: 33313828
Free PMC article.
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PSORTm: a bacterial and archaeal protein subcellular localization prediction tool for metagenomics data.
Peabody MA, Lau WYV, Hoad GR, Jia B, Maguire F, Gray KL, Beiko RG, Brinkman FSL.
Peabody MA, et al. Among authors: hoad gr.
Bioinformatics. 2020 May 1;36(10):3043-3048. doi: 10.1093/bioinformatics/btaa136.
Bioinformatics. 2020.
PMID: 32108861
Free PMC article.
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Subgroup-specific structural variation across 1,000 medulloblastoma genomes.
Northcott PA, Shih DJ, Peacock J, Garzia L, Morrissy AS, Zichner T, Stütz AM, Korshunov A, Reimand J, Schumacher SE, Beroukhim R, Ellison DW, Marshall CR, Lionel AC, Mack S, Dubuc A, Yao Y, Ramaswamy V, Luu B, Rolider A, Cavalli FM, Wang X, Remke M, Wu X, Chiu RY, Chu A, Chuah E, Corbett RD, Hoad GR, Jackman SD, Li Y, Lo A, Mungall KL, Nip KM, Qian JQ, Raymond AG, Thiessen NT, Varhol RJ, Birol I, Moore RA, Mungall AJ, Holt R, Kawauchi D, Roussel MF, Kool M, Jones DT, Witt H, Fernandez-L A, Kenney AM, Wechsler-Reya RJ, Dirks P, Aviv T, Grajkowska WA, Perek-Polnik M, Haberler CC, Delattre O, Reynaud SS, Doz FF, Pernet-Fattet SS, Cho BK, Kim SK, Wang KC, Scheurlen W, Eberhart CG, Fèvre-Montange M, Jouvet A, Pollack IF, Fan X, Muraszko KM, Gillespie GY, Di Rocco C, Massimi L, Michiels EM, Kloosterhof NK, French PJ, Kros JM, Olson JM, Ellenbogen RG, Zitterbart K, Kren L, Thompson RC, Cooper MK, Lach B, McLendon RE, Bigner DD, Fontebasso A, Albrecht S, Jabado N, Lindsey JC, Bailey S, Gupta N, Weiss WA, Bognár L, Klekner A, Van Meter TE, Kumabe T, Tominaga T, Elbabaa SK, Leonard JR, Rubin JB, Liau LM, Van Meir EG, Fouladi M, Nakamura H, Cinalli G, Garami M, Hauser P, Saad AG, Iola…
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Northcott PA, et al. Among authors: hoad gr.
Nature. 2012 Aug 2;488(7409):49-56. doi: 10.1038/nature11327.
Nature. 2012.
PMID: 22832581
Free PMC article.
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