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miRMaster 2.0: multi-species non-coding RNA sequencing analyses at scale.
Fehlmann T, Kern F, Laham O, Backes C, Solomon J, Hirsch P, Volz C, Müller R, Keller A. Fehlmann T, et al. Among authors: hirsch p. Nucleic Acids Res. 2021 Jul 2;49(W1):W397-W408. doi: 10.1093/nar/gkab268. Nucleic Acids Res. 2021. PMID: 33872372 Free PMC article.
PLSDB: advancing a comprehensive database of bacterial plasmids.
Schmartz GP, Hartung A, Hirsch P, Kern F, Fehlmann T, Müller R, Keller A. Schmartz GP, et al. Among authors: hirsch p. Nucleic Acids Res. 2022 Jan 7;50(D1):D273-D278. doi: 10.1093/nar/gkab1111. Nucleic Acids Res. 2022. PMID: 34850116 Free PMC article.
isomiRdb: microRNA expression at isoform resolution.
Aparicio-Puerta E, Hirsch P, Schmartz GP, Fehlmann T, Keller V, Engel A, Kern F, Hackenberg M, Keller A. Aparicio-Puerta E, et al. Among authors: hirsch p. Nucleic Acids Res. 2023 Jan 6;51(D1):D179-D185. doi: 10.1093/nar/gkac884. Nucleic Acids Res. 2023. PMID: 36243964 Free PMC article.
WebQUAST: online evaluation of genome assemblies.
Mikheenko A, Saveliev V, Hirsch P, Gurevich A. Mikheenko A, et al. Among authors: hirsch p. Nucleic Acids Res. 2023 Jul 5;51(W1):W601-W606. doi: 10.1093/nar/gkad406. Nucleic Acids Res. 2023. PMID: 37194696 Free PMC article.
ABC-HuMi: the Atlas of Biosynthetic Gene Clusters in the Human Microbiome.
Hirsch P, Tagirdzhanov A, Kushnareva A, Olkhovskii I, Graf S, Schmartz GP, Hegemann JD, Bozhüyük KAJ, Müller R, Keller A, Gurevich A. Hirsch P, et al. Nucleic Acids Res. 2024 Jan 5;52(D1):D579-D585. doi: 10.1093/nar/gkad1086. Nucleic Acids Res. 2024. PMID: 37994699 Free PMC article.
454 results