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Tomosipo: fast, flexible, and convenient 3D tomography for complex scanning geometries in Python.
Opt Express. 2021 Nov 22;29(24):40494-40513. doi: 10.1364/OE.439909.
Opt Express. 2021.
PMID: 34809388
Free article.
Deep-learning-based joint rigid and deformable contour propagation for magnetic resonance imaging-guided prostate radiotherapy.
Kolenbrander ID, Maspero M, Hendriksen AA, Pollitt R, van der Voort van Zyp JRN, van den Berg CAT, Pluim JPW, van Eijnatten MAJM.
Kolenbrander ID, et al. Among authors: hendriksen aa.
Med Phys. 2024 Apr;51(4):2367-2377. doi: 10.1002/mp.17000. Epub 2024 Feb 26.
Med Phys. 2024.
PMID: 38408022
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Deep denoising for multi-dimensional synchrotron X-ray tomography without high-quality reference data.
Hendriksen AA, Bührer M, Leone L, Merlini M, Vigano N, Pelt DM, Marone F, di Michiel M, Batenburg KJ.
Hendriksen AA, et al.
Sci Rep. 2021 Jun 4;11(1):11895. doi: 10.1038/s41598-021-91084-8.
Sci Rep. 2021.
PMID: 34088936
Free PMC article.
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Foam-like phantoms for comparing tomography algorithms.
Pelt DM, Hendriksen AA, Batenburg KJ.
Pelt DM, et al. Among authors: hendriksen aa.
J Synchrotron Radiat. 2022 Jan 1;29(Pt 1):254-265. doi: 10.1107/S1600577521011322. Epub 2022 Jan 1.
J Synchrotron Radiat. 2022.
PMID: 34985443
Free PMC article.
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How auto-differentiation can improve CT workflows: classical algorithms in a modern framework.
Schoonhoven R, Skorikov A, Palenstijn WJ, Pelt DM, Hendriksen AA, Batenburg KJ.
Schoonhoven R, et al. Among authors: hendriksen aa.
Opt Express. 2024 Mar 11;32(6):9019-9041. doi: 10.1364/OE.502920.
Opt Express. 2024.
PMID: 38571146
Free article.
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Segmentation of dental cone-beam CT scans affected by metal artifacts using a mixed-scale dense convolutional neural network.
Minnema J, van Eijnatten M, Hendriksen AA, Liberton N, Pelt DM, Batenburg KJ, Forouzanfar T, Wolff J.
Minnema J, et al. Among authors: hendriksen aa.
Med Phys. 2019 Nov;46(11):5027-5035. doi: 10.1002/mp.13793. Epub 2019 Sep 13.
Med Phys. 2019.
PMID: 31463937
Free PMC article.
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Deep learning based classification of dynamic processes in time-resolved X-ray tomographic microscopy.
Bührer M, Xu H, Hendriksen AA, Büchi FN, Eller J, Stampanoni M, Marone F.
Bührer M, et al. Among authors: hendriksen aa.
Sci Rep. 2021 Dec 17;11(1):24174. doi: 10.1038/s41598-021-03546-8.
Sci Rep. 2021.
PMID: 34921184
Free PMC article.
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