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ANHIR: Automatic Non-Rigid Histological Image Registration Challenge.
Borovec J, Kybic J, Arganda-Carreras I, Sorokin DV, Bueno G, Khvostikov AV, Bakas S, Chang EI, Heldmann S, Kartasalo K, Latonen L, Lotz J, Noga M, Pati S, Punithakumar K, Ruusuvuori P, Skalski A, Tahmasebi N, Valkonen M, Venet L, Wang Y, Weiss N, Wodzinski M, Xiang Y, Xu Y, Yan Y, Yushkevich P, Zhao S, Munoz-Barrutia A. Borovec J, et al. Among authors: heldmann s. IEEE Trans Med Imaging. 2020 Oct;39(10):3042-3052. doi: 10.1109/TMI.2020.2986331. Epub 2020 Apr 7. IEEE Trans Med Imaging. 2020. PMID: 32275587 Free PMC article.
Learn2Reg: Comprehensive Multi-Task Medical Image Registration Challenge, Dataset and Evaluation in the Era of Deep Learning.
Hering A, Hansen L, Mok TCW, Chung ACS, Siebert H, Hager S, Lange A, Kuckertz S, Heldmann S, Shao W, Vesal S, Rusu M, Sonn G, Estienne T, Vakalopoulou M, Han L, Huang Y, Yap PT, Brudfors M, Balbastre Y, Joutard S, Modat M, Lifshitz G, Raviv D, Lv J, Li Q, Jaouen V, Visvikis D, Fourcade C, Rubeaux M, Pan W, Xu Z, Jian B, De Benetti F, Wodzinski M, Gunnarsson N, Sjolund J, Grzech D, Qiu H, Li Z, Thorley A, Duan J, Grosbrohmer C, Hoopes A, Reinertsen I, Xiao Y, Landman B, Huo Y, Murphy K, Lessmann N, van Ginneken B, Dalca AV, Heinrich MP. Hering A, et al. Among authors: heldmann s. IEEE Trans Med Imaging. 2023 Mar;42(3):697-712. doi: 10.1109/TMI.2022.3213983. Epub 2023 Mar 2. IEEE Trans Med Imaging. 2023. PMID: 36264729
Patch-Based Nonlinear Image Registration for Gigapixel Whole Slide Images.
Lotz J, Olesch J, Muller B, Polzin T, Galuschka P, Lotz JM, Heldmann S, Laue H, Gonzalez-Vallinas M, Warth A, Lahrmann B, Grabe N, Sedlaczek O, Breuhahn K, Modersitzki J. Lotz J, et al. Among authors: heldmann s. IEEE Trans Biomed Eng. 2016 Sep;63(9):1812-1819. doi: 10.1109/TBME.2015.2503122. Epub 2015 Nov 23. IEEE Trans Biomed Eng. 2016. PMID: 26625400
Integration of 3D multimodal imaging data of a head and neck cancer and advanced feature recognition.
Lotz JM, Hoffmann F, Lotz J, Heldmann S, Trede D, Oetjen J, Becker M, Ernst G, Maas P, Alexandrov T, Guntinas-Lichius O, Thiele H, von Eggeling F. Lotz JM, et al. Among authors: heldmann s. Biochim Biophys Acta Proteins Proteom. 2017 Jul;1865(7):946-956. doi: 10.1016/j.bbapap.2016.08.018. Epub 2016 Sep 1. Biochim Biophys Acta Proteins Proteom. 2017. PMID: 27594533
CNN-based lung CT registration with multiple anatomical constraints.
Hering A, Häger S, Moltz J, Lessmann N, Heldmann S, van Ginneken B. Hering A, et al. Among authors: heldmann s. Med Image Anal. 2021 Aug;72:102139. doi: 10.1016/j.media.2021.102139. Epub 2021 Jun 22. Med Image Anal. 2021. PMID: 34216959 Free PMC article.
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