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High-resolution silkworm pan-genome provides genetic insights into artificial selection and ecological adaptation.
Tong X, Han MJ, Lu K, Tai S, Liang S, Liu Y, Hu H, Shen J, Long A, Zhan C, Ding X, Liu S, Gao Q, Zhang B, Zhou L, Tan D, Yuan Y, Guo N, Li YH, Wu Z, Liu L, Li C, Lu Y, Gai T, Zhang Y, Yang R, Qian H, Liu Y, Luo J, Zheng L, Lou J, Peng Y, Zuo W, Song J, He S, Wu S, Zou Y, Zhou L, Cheng L, Tang Y, Cheng G, Yuan L, He W, Xu J, Fu T, Xiao Y, Lei T, Xu A, Yin Y, Wang J, Monteiro A, Westhof E, Lu C, Tian Z, Wang W, Xiang Z, Dai F. Tong X, et al. Among authors: he s, he w. Nat Commun. 2022 Sep 24;13(1):5619. doi: 10.1038/s41467-022-33366-x. Nat Commun. 2022. PMID: 36153338 Free PMC article.
Resequencing 50 accessions of cultivated and wild rice yields markers for identifying agronomically important genes.
Xu X, Liu X, Ge S, Jensen JD, Hu F, Li X, Dong Y, Gutenkunst RN, Fang L, Huang L, Li J, He W, Zhang G, Zheng X, Zhang F, Li Y, Yu C, Kristiansen K, Zhang X, Wang J, Wright M, McCouch S, Nielsen R, Wang J, Wang W. Xu X, et al. Among authors: he w. Nat Biotechnol. 2011 Dec 11;30(1):105-11. doi: 10.1038/nbt.2050. Nat Biotechnol. 2011. PMID: 22158310
Aegilops tauschii draft genome sequence reveals a gene repertoire for wheat adaptation.
Jia J, Zhao S, Kong X, Li Y, Zhao G, He W, Appels R, Pfeifer M, Tao Y, Zhang X, Jing R, Zhang C, Ma Y, Gao L, Gao C, Spannagl M, Mayer KF, Li D, Pan S, Zheng F, Hu Q, Xia X, Li J, Liang Q, Chen J, Wicker T, Gou C, Kuang H, He G, Luo Y, Keller B, Xia Q, Lu P, Wang J, Zou H, Zhang R, Xu J, Gao J, Middleton C, Quan Z, Liu G, Wang J; International Wheat Genome Sequencing Consortium; Yang H, Liu X, He Z, Mao L, Wang J. Jia J, et al. Among authors: he w, he g, he z. Nature. 2013 Apr 4;496(7443):91-5. doi: 10.1038/nature12028. Epub 2013 Mar 24. Nature. 2013. PMID: 23535592 Free article.
Analysis of elite variety tag SNPs reveals an important allele in upland rice.
Lyu J, Zhang S, Dong Y, He W, Zhang J, Deng X, Zhang Y, Li X, Li B, Huang W, Wan W, Yu Y, Li Q, Li J, Liu X, Wang B, Tao D, Zhang G, Wang J, Xu X, Hu F, Wang W. Lyu J, et al. Among authors: he w. Nat Commun. 2013;4:2138. doi: 10.1038/ncomms3138. Nat Commun. 2013. PMID: 23828614 Free PMC article.
The seahorse genome and the evolution of its specialized morphology.
Lin Q, Fan S, Zhang Y, Xu M, Zhang H, Yang Y, Lee AP, Woltering JM, Ravi V, Gunter HM, Luo W, Gao Z, Lim ZW, Qin G, Schneider RF, Wang X, Xiong P, Li G, Wang K, Min J, Zhang C, Qiu Y, Bai J, He W, Bian C, Zhang X, Shan D, Qu H, Sun Y, Gao Q, Huang L, Shi Q, Meyer A, Venkatesh B. Lin Q, et al. Among authors: he w. Nature. 2016 Dec 14;540(7633):395-399. doi: 10.1038/nature20595. Nature. 2016. PMID: 27974754 Free PMC article.
Origin and evolution of qingke barley in Tibet.
Zeng X, Guo Y, Xu Q, Mascher M, Guo G, Li S, Mao L, Liu Q, Xia Z, Zhou J, Yuan H, Tai S, Wang Y, Wei Z, Song L, Zha S, Li S, Tang Y, Bai L, Zhuang Z, He W, Zhao S, Fang X, Gao Q, Yin Y, Wang J, Yang H, Zhang J, Henry RJ, Stein N, Tashi N. Zeng X, et al. Among authors: he w. Nat Commun. 2018 Dec 21;9(1):5433. doi: 10.1038/s41467-018-07920-5. Nat Commun. 2018. PMID: 30575759 Free PMC article.
Comparative genome anatomy reveals evolutionary insights into a unique amphitriploid fish.
Wang Y, Li XY, Xu WJ, Wang K, Wu B, Xu M, Chen Y, Miao LJ, Wang ZW, Li Z, Zhang XJ, Yin Z, Zhou BT, Yang YL, Zhu CL, Hu ML, Zheng JM, Feng CG, Qiu Q, Tian LT, Lu M, Peng F, Lu WJ, Tong JF, Tong JG, Fu BD, Yu P, Ding M, Gan RH, Zhang QQ, Jian JB, Zhang C, He WM, Yang W, Zhao ZC, Zhang QQ, Gao Q, Xu JY, Bai MZ, Zhang YP, Yang HM, Fang XD, Wang W, Zhou L, Gui JF. Wang Y, et al. Among authors: he wm. Nat Ecol Evol. 2022 Sep;6(9):1354-1366. doi: 10.1038/s41559-022-01813-z. Epub 2022 Jul 11. Nat Ecol Evol. 2022. PMID: 35817827 Free PMC article.
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