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Large-scale benchmarking of circRNA detection tools reveals large differences in sensitivity but not in precision.
Vromman M, Anckaert J, Bortoluzzi S, Buratin A, Chen CY, Chu Q, Chuang TJ, Dehghannasiri R, Dieterich C, Dong X, Flicek P, Gaffo E, Gu W, He C, Hoffmann S, Izuogu O, Jackson MS, Jakobi T, Lai EC, Nuytens J, Salzman J, Santibanez-Koref M, Stadler P, Thas O, Vanden Eynde E, Verniers K, Wen G, Westholm J, Yang L, Ye CY, Yigit N, Yuan GH, Zhang J, Zhao F, Vandesompele J, Volders PJ. Vromman M, et al. Among authors: he c. Nat Methods. 2023 Aug;20(8):1159-1169. doi: 10.1038/s41592-023-01944-6. Epub 2023 Jul 13. Nat Methods. 2023. PMID: 37443337 Free PMC article.
CircRNA inhibits DNA damage repair by interacting with host gene.
Xu X, Zhang J, Tian Y, Gao Y, Dong X, Chen W, Yuan X, Yin W, Xu J, Chen K, He C, Wei L. Xu X, et al. Among authors: he c. Mol Cancer. 2020 Aug 24;19(1):128. doi: 10.1186/s12943-020-01246-x. Mol Cancer. 2020. PMID: 32838810 Free PMC article.
Circular RNA circYPEL2: A Novel Biomarker in Cervical Cancer.
Zhang X, Yang S, Chen W, Dong X, Zhang R, Ye H, Mei X, Liu H, Fang Y, He C. Zhang X, et al. Among authors: he c. Genes (Basel). 2021 Dec 23;13(1):38. doi: 10.3390/genes13010038. Genes (Basel). 2021. PMID: 35052380 Free PMC article.
CSCD2: an integrated interactional database of cancer-specific circular RNAs.
Feng J, Chen W, Dong X, Wang J, Mei X, Deng J, Yang S, Zhuo C, Huang X, Shao L, Zhang R, Guo J, Ma R, Liu J, Li F, Wu Y, Han L, He C. Feng J, et al. Among authors: he c. Nucleic Acids Res. 2022 Jan 7;50(D1):D1179-D1183. doi: 10.1093/nar/gkab830. Nucleic Acids Res. 2022. PMID: 34551437 Free PMC article.
Author Correction: Targeted inhibition of STAT/TET1 axis as a therapeutic strategy for acute myeloid leukemia.
Jiang X, Hu C, Ferchen K, Nie J, Cui X, Chen CH, Cheng L, Zuo Z, Seibel W, He C, Tang Y, Skibbe JR, Wunderlich M, Reinhold WC, Dong L, Shen C, Arnovitz S, Ulrich B, Lu J, Weng H, Su R, Huang H, Wang Y, Li C, Qin X, Mulloy JC, Zheng Y, Diao J, Jin J, Li C, Liu PP, He C, Chen Y, Chen J. Jiang X, et al. Among authors: he c. Nat Commun. 2018 Feb 9;9(1):670. doi: 10.1038/s41467-018-02947-0. Nat Commun. 2018. PMID: 29426862 Free PMC article.
Targeted inhibition of STAT/TET1 axis as a therapeutic strategy for acute myeloid leukemia.
Jiang X, Hu C, Ferchen K, Nie J, Cui X, Chen CH, Cheng L, Zuo Z, Seibel W, He C, Tang Y, Skibbe JR, Wunderlich M, Reinhold WC, Dong L, Shen C, Arnovitz S, Ulrich B, Lu J, Weng H, Su R, Huang H, Wang Y, Li C, Qin X, Mulloy JC, Zheng Y, Diao J, Jin J, Li C, Liu PP, He C, Chen Y, Chen J. Jiang X, et al. Among authors: he c. Nat Commun. 2017 Dec 13;8(1):2099. doi: 10.1038/s41467-017-02290-w. Nat Commun. 2017. PMID: 29235481 Free PMC article.
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