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FRET-based dynamic structural biology: Challenges, perspectives and an appeal for open-science practices.
Lerner E, Barth A, Hendrix J, Ambrose B, Birkedal V, Blanchard SC, Börner R, Sung Chung H, Cordes T, Craggs TD, Deniz AA, Diao J, Fei J, Gonzalez RL, Gopich IV, Ha T, Hanke CA, Haran G, Hatzakis NS, Hohng S, Hong SC, Hugel T, Ingargiola A, Joo C, Kapanidis AN, Kim HD, Laurence T, Lee NK, Lee TH, Lemke EA, Margeat E, Michaelis J, Michalet X, Myong S, Nettels D, Peulen TO, Ploetz E, Razvag Y, Robb NC, Schuler B, Soleimaninejad H, Tang C, Vafabakhsh R, Lamb DC, Seidel CA, Weiss S. Lerner E, et al. Among authors: hatzakis ns. Elife. 2021 Mar 29;10:e60416. doi: 10.7554/eLife.60416. Elife. 2021. PMID: 33779550 Free PMC article. Review.
A blind benchmark of analysis tools to infer kinetic rate constants from single-molecule FRET trajectories.
Götz M, Barth A, Bohr SS, Börner R, Chen J, Cordes T, Erie DA, Gebhardt C, Hadzic MCAS, Hamilton GL, Hatzakis NS, Hugel T, Kisley L, Lamb DC, de Lannoy C, Mahn C, Dunukara D, de Ridder D, Sanabria H, Schimpf J, Seidel CAM, Sigel RKO, Sletfjerding MB, Thomsen J, Vollmar L, Wanninger S, Weninger KR, Xu P, Schmid S. Götz M, et al. Among authors: hatzakis ns. Nat Commun. 2022 Sep 14;13(1):5402. doi: 10.1038/s41467-022-33023-3. Nat Commun. 2022. PMID: 36104339 Free PMC article.
Reply to: On the statistical foundation of a recent single molecule FRET benchmark.
Götz M, Barth A, Bohr SS, Börner R, Chen J, Cordes T, Erie DA, Gebhardt C, Hadzic MCAS, Hamilton GL, Hatzakis NS, Hugel T, Kisley L, Lamb DC, de Lannoy C, Mahn C, Dunukara D, de Ridder D, Sanabria H, Schimpf J, Seidel CAM, Sigel RKO, Sletfjerding MB, Thomsen J, Vollmar L, Wanninger S, Weninger KR, Xu P, Schmid S. Götz M, et al. Among authors: hatzakis ns. Nat Commun. 2024 Apr 30;15(1):3626. doi: 10.1038/s41467-024-47734-2. Nat Commun. 2024. PMID: 38688911 Free PMC article. No abstract available.
Biased cytochrome P450-mediated metabolism via small-molecule ligands binding P450 oxidoreductase.
Jensen SB, Thodberg S, Parween S, Moses ME, Hansen CC, Thomsen J, Sletfjerding MB, Knudsen C, Del Giudice R, Lund PM, Castaño PR, Bustamante YG, Velazquez MNR, Jørgensen FS, Pandey AV, Laursen T, Møller BL, Hatzakis NS. Jensen SB, et al. Among authors: hatzakis ns. Nat Commun. 2021 Apr 15;12(1):2260. doi: 10.1038/s41467-021-22562-w. Nat Commun. 2021. PMID: 33859207 Free PMC article.
Everything, everywhere, almost at once.
Kæstel-Hansen J, Hatzakis NS. Kæstel-Hansen J, et al. Among authors: hatzakis ns. Elife. 2024 Jan 29;13:e95362. doi: 10.7554/eLife.95362. Elife. 2024. PMID: 38285015 Free PMC article.
65 results