Harcombe WR - Search Results

1

Competitive resource allocation to metabolic pathways contributes to overflow metabolisms and emergent properties in cross-feeding microbial consortia.

Carlson RP, Beck AE, Phalak P, Fields MW, Gedeon T, Hanley L, Harcombe WR, Henson MA, Heys JJ. Carlson RP, et al. Among authors: harcombe wr. Biochem Soc Trans. 2018 Apr 17;46(2):269-284. doi: 10.1042/BST20170242. Epub 2018 Feb 22. Biochem Soc Trans. 2018. PMID: 29472366 Review.

2

A shared limiting resource leads to competitive exclusion in a cross-feeding system.

Hammarlund SP, Chacón JM, Harcombe WR. Hammarlund SP, et al. Among authors: harcombe wr. Environ Microbiol. 2019 Feb;21(2):759-771. doi: 10.1111/1462-2920.14493. Epub 2019 Jan 8. Environ Microbiol. 2019. PMID: 30507059 Free PMC article.

3

Limitation by a shared mutualist promotes coexistence of multiple competing partners.

Hammarlund SP, Gedeon T, Carlson RP, Harcombe WR. Hammarlund SP, et al. Among authors: harcombe wr. Nat Commun. 2021 Jan 27;12(1):619. doi: 10.1038/s41467-021-20922-0. Nat Commun. 2021. PMID: 33504808 Free PMC article.

4

Environment Constrains Fitness Advantages of Division of Labor in Microbial Consortia Engineered for Metabolite Push or Pull Interactions.

Beck AE, Pintar K, Schepens D, Schrammeck A, Johnson T, Bleem A, Du M, Harcombe WR, Bernstein HC, Heys JJ, Gedeon T, Carlson RP. Beck AE, et al. Among authors: harcombe wr. mSystems. 2022 Aug 30;7(4):e0005122. doi: 10.1128/msystems.00051-22. Epub 2022 Jun 28. mSystems. 2022. PMID: 35762764 Free PMC article.

5

Cross-feeding modulates the rate and mechanism of antibiotic resistance evolution in a model microbial community of Escherichia coli and Salmonella enterica.

Adamowicz EM, Muza M, Chacón JM, Harcombe WR. Adamowicz EM, et al. Among authors: harcombe wr. PLoS Pathog. 2020 Jul 20;16(7):e1008700. doi: 10.1371/journal.ppat.1008700. eCollection 2020 Jul. PLoS Pathog. 2020. PMID: 32687537 Free PMC article.

6

A metabolic modeling platform for the computation of microbial ecosystems in time and space (COMETS).

Dukovski I, Bajić D, Chacón JM, Quintin M, Vila JCC, Sulheim S, Pacheco AR, Bernstein DB, Riehl WJ, Korolev KS, Sanchez A, Harcombe WR, Segrè D. Dukovski I, et al. Among authors: harcombe wr. Nat Protoc. 2021 Nov;16(11):5030-5082. doi: 10.1038/s41596-021-00593-3. Epub 2021 Oct 11. Nat Protoc. 2021. PMID: 34635859 Free PMC article. Review.

7

Ecological modelling approaches for predicting emergent properties in microbial communities.

van den Berg NI, Machado D, Santos S, Rocha I, Chacón J, Harcombe W, Mitri S, Patil KR. van den Berg NI, et al. Nat Ecol Evol. 2022 Jul;6(7):855-865. doi: 10.1038/s41559-022-01746-7. Epub 2022 May 16. Nat Ecol Evol. 2022. PMID: 35577982 Free PMC article. Review.

8

Species interactions differ in their genetic robustness.

Chubiz LM, Granger BR, Segrè D, Harcombe WR. Chubiz LM, et al. Among authors: harcombe wr. Front Microbiol. 2015 Apr 14;6:271. doi: 10.3389/fmicb.2015.00271. eCollection 2015. Front Microbiol. 2015. PMID: 25926820 Free PMC article.

9

The spatial and metabolic basis of colony size variation.

Chacón JM, Möbius W, Harcombe WR. Chacón JM, et al. Among authors: harcombe wr. ISME J. 2018 Mar;12(3):669-680. doi: 10.1038/s41396-017-0038-0. Epub 2018 Jan 24. ISME J. 2018. PMID: 29367665 Free PMC article.

10

Cross-feeding modulates antibiotic tolerance in bacterial communities.

Adamowicz EM, Flynn J, Hunter RC, Harcombe WR. Adamowicz EM, et al. Among authors: harcombe wr. ISME J. 2018 Nov;12(11):2723-2735. doi: 10.1038/s41396-018-0212-z. Epub 2018 Jul 10. ISME J. 2018. PMID: 29991761 Free PMC article.

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