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Microscopy-based assay for semi-quantitative detection of SARS-CoV-2 specific antibodies in human sera: A semi-quantitative, high throughput, microscopy-based assay expands existing approaches to measure SARS-CoV-2 specific antibody levels in human sera.
Pape C, Remme R, Wolny A, Olberg S, Wolf S, Cerrone L, Cortese M, Klaus S, Lucic B, Ullrich S, Anders-Össwein M, Wolf S, Cerikan B, Neufeldt CJ, Ganter M, Schnitzler P, Merle U, Lusic M, Boulant S, Stanifer M, Bartenschlager R, Hamprecht FA, Kreshuk A, Tischer C, Kräusslich HG, Müller B, Laketa V. Pape C, et al. Among authors: hamprecht fa. Bioessays. 2021 Mar;43(3):e2000257. doi: 10.1002/bies.202000257. Epub 2020 Dec 30. Bioessays. 2021. PMID: 33377226 Free PMC article.
ilastik: interactive machine learning for (bio)image analysis.
Berg S, Kutra D, Kroeger T, Straehle CN, Kausler BX, Haubold C, Schiegg M, Ales J, Beier T, Rudy M, Eren K, Cervantes JI, Xu B, Beuttenmueller F, Wolny A, Zhang C, Koethe U, Hamprecht FA, Kreshuk A. Berg S, et al. Among authors: hamprecht fa. Nat Methods. 2019 Dec;16(12):1226-1232. doi: 10.1038/s41592-019-0582-9. Epub 2019 Sep 30. Nat Methods. 2019. PMID: 31570887 Review.
Segmenting and Tracking Multiple Dividing Targets Using ilastik.
Haubold C, Schiegg M, Kreshuk A, Berg S, Koethe U, Hamprecht FA. Haubold C, et al. Among authors: hamprecht fa. Adv Anat Embryol Cell Biol. 2016;219:199-229. doi: 10.1007/978-3-319-28549-8_8. Adv Anat Embryol Cell Biol. 2016. PMID: 27207368 Review.
Accurate and versatile 3D segmentation of plant tissues at cellular resolution.
Wolny A, Cerrone L, Vijayan A, Tofanelli R, Barro AV, Louveaux M, Wenzl C, Strauss S, Wilson-Sánchez D, Lymbouridou R, Steigleder SS, Pape C, Bailoni A, Duran-Nebreda S, Bassel GW, Lohmann JU, Tsiantis M, Hamprecht FA, Schneitz K, Maizel A, Kreshuk A. Wolny A, et al. Among authors: hamprecht fa. Elife. 2020 Jul 29;9:e57613. doi: 10.7554/eLife.57613. Elife. 2020. PMID: 32723478 Free PMC article.
Multicut brings automated neurite segmentation closer to human performance.
Beier T, Pape C, Rahaman N, Prange T, Berg S, Bock DD, Cardona A, Knott GW, Plaza SM, Scheffer LK, Koethe U, Kreshuk A, Hamprecht FA. Beier T, et al. Among authors: hamprecht fa. Nat Methods. 2017 Jan 31;14(2):101-102. doi: 10.1038/nmeth.4151. Nat Methods. 2017. PMID: 28139671 No abstract available.
From experimental setup to bioinformatics: an RNAi screening platform to identify host factors involved in HIV-1 replication.
Börner K, Hermle J, Sommer C, Brown NP, Knapp B, Glass B, Kunkel J, Torralba G, Reymann J, Beil N, Beneke J, Pepperkok R, Schneider R, Ludwig T, Hausmann M, Hamprecht F, Erfle H, Kaderali L, Kräusslich HG, Lehmann MJ. Börner K, et al. Biotechnol J. 2010 Jan;5(1):39-49. doi: 10.1002/biot.200900226. Biotechnol J. 2010. PMID: 20013946
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