Skip to main page content
U.S. flag

An official website of the United States government

Dot gov

The .gov means it’s official.
Federal government websites often end in .gov or .mil. Before sharing sensitive information, make sure you’re on a federal government site.

Https

The site is secure.
The https:// ensures that you are connecting to the official website and that any information you provide is encrypted and transmitted securely.

Access keys NCBI Homepage MyNCBI Homepage Main Content Main Navigation

Search Page

Filters

My NCBI Filters

Text availability

Article attribute

Article type

Publication date

Search Results

708 results

Filters applied: . Clear all
Results are displayed in a computed author sort order. The Results By Year timeline is not available.
Page 1
In silico design of ligand triggered RNA switches.
Findeiß S, Hammer S, Wolfinger MT, Kühnl F, Flamm C, Hofacker IL. Findeiß S, et al. Among authors: hammer s. Methods. 2018 Jul 1;143:90-101. doi: 10.1016/j.ymeth.2018.04.003. Epub 2018 Apr 13. Methods. 2018. PMID: 29660485
Computational design of RNAs with complex energy landscapes.
Höner zu Siederdissen C, Hammer S, Abfalter I, Hofacker IL, Flamm C, Stadler PF. Höner zu Siederdissen C, et al. Among authors: hammer s. Biopolymers. 2013 Dec;99(12):1124-36. doi: 10.1002/bip.22337. Biopolymers. 2013. PMID: 23818234
Thermodynamic and kinetic folding of riboswitches.
Badelt S, Hammer S, Flamm C, Hofacker IL. Badelt S, et al. Among authors: hammer s. Methods Enzymol. 2015;553:193-213. doi: 10.1016/bs.mie.2014.10.060. Epub 2015 Feb 12. Methods Enzymol. 2015. PMID: 25726466
RNAblueprint: flexible multiple target nucleic acid sequence design.
Hammer S, Tschiatschek B, Flamm C, Hofacker IL, Findeiß S. Hammer S, et al. Bioinformatics. 2017 Sep 15;33(18):2850-2858. doi: 10.1093/bioinformatics/btx263. Bioinformatics. 2017. PMID: 28449031 Free PMC article.
AVAILABILITY AND IMPLEMENTATION: RNAblueprint , Python implementations and benchmark datasets are available at github: https://github.com/ViennaRNA . CONTACT: s.hammer@univie.ac.at, ivo@tbi.univie.ac.at or sven@tbi.univie.ac.at. ...
AVAILABILITY AND IMPLEMENTATION: RNAblueprint , Python implementations and benchmark datasets are available at github: https://github.com/Vi …
Advanced Design of Structural RNAs Using RNARedPrint.
Ponty Y, Hammer S, Yao HT, Will S. Ponty Y, et al. Among authors: hammer s. Methods Mol Biol. 2021;2284:1-15. doi: 10.1007/978-1-0716-1307-8_1. Methods Mol Biol. 2021. PMID: 33835434
DrForna: visualization of cotranscriptional folding.
Tănasie AR, Kerpedjiev P, Hammer S, Badelt S. Tănasie AR, et al. Among authors: hammer s. Bioinformatics. 2023 Sep 2;39(9):btad555. doi: 10.1093/bioinformatics/btad555. Bioinformatics. 2023. PMID: 37682108 Free PMC article.
708 results