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The contrasting phylodynamics of human influenza B viruses.
Vijaykrishna D, Holmes EC, Joseph U, Fourment M, Su YC, Halpin R, Lee RT, Deng YM, Gunalan V, Lin X, Stockwell TB, Fedorova NB, Zhou B, Spirason N, Kühnert D, Bošková V, Stadler T, Costa AM, Dwyer DE, Huang QS, Jennings LC, Rawlinson W, Sullivan SG, Hurt AC, Maurer-Stroh S, Wentworth DE, Smith GJ, Barr IG. Vijaykrishna D, et al. Among authors: halpin r. Elife. 2015 Jan 16;4:e05055. doi: 10.7554/eLife.05055. Elife. 2015. PMID: 25594904 Free PMC article.
Mixed infection and the genesis of influenza virus diversity.
Ghedin E, Fitch A, Boyne A, Griesemer S, DePasse J, Bera J, Zhang X, Halpin RA, Smit M, Jennings L, St George K, Holmes EC, Spiro DJ. Ghedin E, et al. J Virol. 2009 Sep;83(17):8832-41. doi: 10.1128/JVI.00773-09. Epub 2009 Jun 24. J Virol. 2009. PMID: 19553313 Free PMC article.
The early diversification of influenza A/H1N1pdm.
Nelson M, Spiro D, Wentworth D, Beck E, Fan J, Ghedin E, Halpin R, Bera J, Hine E, Proudfoot K, Stockwell T, Lin X, Griesemer S, Kumar S, Bose M, Viboud C, Holmes E, Henrickson K. Nelson M, et al. Among authors: halpin r. PLoS Curr. 2009 Nov 3;1:RRN1126. doi: 10.1371/currents.rrn1126. PLoS Curr. 2009. PMID: 20029664 Free PMC article.
Unseasonal transmission of H3N2 influenza A virus during the swine-origin H1N1 pandemic.
Ghedin E, Wentworth DE, Halpin RA, Lin X, Bera J, DePasse J, Fitch A, Griesemer S, Hine E, Katzel DA, Overton L, Proudfoot K, Sitz J, Szczypinski B, StGeorge K, Spiro DJ, Holmes EC. Ghedin E, et al. J Virol. 2010 Jun;84(11):5715-8. doi: 10.1128/JVI.00018-10. Epub 2010 Mar 17. J Virol. 2010. PMID: 20237080 Free PMC article.
Deep sequencing reveals mixed infection with 2009 pandemic influenza A (H1N1) virus strains and the emergence of oseltamivir resistance.
Ghedin E, Laplante J, DePasse J, Wentworth DE, Santos RP, Lepow ML, Porter J, Stellrecht K, Lin X, Operario D, Griesemer S, Fitch A, Halpin RA, Stockwell TB, Spiro DJ, Holmes EC, St George K. Ghedin E, et al. J Infect Dis. 2011 Jan 15;203(2):168-74. doi: 10.1093/infdis/jiq040. J Infect Dis. 2011. PMID: 21288815 Free PMC article.
Extensive geographical mixing of 2009 human H1N1 influenza A virus in a single university community.
Holmes EC, Ghedin E, Halpin RA, Stockwell TB, Zhang XQ, Fleming R, Davey R, Benson CA, Mehta S, Taplitz R, Liu YT, Brouwer KC, Wentworth DE, Lin X, Schooley RT; INSIGHT FLU002 Study Group. Holmes EC, et al. Among authors: halpin ra. J Virol. 2011 Jul;85(14):6923-9. doi: 10.1128/JVI.00438-11. Epub 2011 May 18. J Virol. 2011. PMID: 21593168 Free PMC article.
Genomic and protein structural maps of adaptive evolution of human influenza A virus to increased virulence in the mouse.
Ping J, Keleta L, Forbes NE, Dankar S, Stecho W, Tyler S, Zhou Y, Babiuk L, Weingartl H, Halpin RA, Boyne A, Bera J, Hostetler J, Fedorova NB, Proudfoot K, Katzel DA, Stockwell TB, Ghedin E, Spiro DJ, Brown EG. Ping J, et al. PLoS One. 2011;6(6):e21740. doi: 10.1371/journal.pone.0021740. Epub 2011 Jun 30. PLoS One. 2011. PMID: 21738783 Free PMC article.
157 results