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New technologies for DNA analysis--a review of the READNA Project.
McGinn S, Bauer D, Brefort T, Dong L, El-Sagheer A, Elsharawy A, Evans G, Falk-Sörqvist E, Forster M, Fredriksson S, Freeman P, Freitag C, Fritzsche J, Gibson S, Gullberg M, Gut M, Heath S, Heath-Brun I, Heron AJ, Hohlbein J, Ke R, Lancaster O, Le Reste L, Maglia G, Marie R, Mauger F, Mertes F, Mignardi M, Moens L, Oostmeijer J, Out R, Pedersen JN, Persson F, Picaud V, Rotem D, Schracke N, Sengenes J, Stähler PF, Stade B, Stoddart D, Teng X, Veal CD, Zahra N, Bayley H, Beier M, Brown T, Dekker C, Ekström B, Flyvbjerg H, Franke A, Guenther S, Kapanidis AN, Kaye J, Kristensen A, Lehrach H, Mangion J, Sauer S, Schyns E, Tost J, van Helvoort JM, van der Zaag PJ, Tegenfeldt JO, Brookes AJ, Mir K, Nilsson M, Willcocks JP, Gut IG. McGinn S, et al. Among authors: gut m, gut ig. N Biotechnol. 2016 May 25;33(3):311-30. doi: 10.1016/j.nbt.2015.10.003. Epub 2015 Oct 26. N Biotechnol. 2016. PMID: 26514324 Review.
Tuning of natural killer cell reactivity by NKp46 and Helios calibrates T cell responses.
Narni-Mancinelli E, Jaeger BN, Bernat C, Fenis A, Kung S, De Gassart A, Mahmood S, Gut M, Heath SC, Estellé J, Bertosio E, Vely F, Gastinel LN, Beutler B, Malissen B, Malissen M, Gut IG, Vivier E, Ugolini S. Narni-Mancinelli E, et al. Among authors: gut m, gut ig. Science. 2012 Jan 20;335(6066):344-8. doi: 10.1126/science.1215621. Science. 2012. PMID: 22267813
Reproducibility of high-throughput mRNA and small RNA sequencing across laboratories.
't Hoen PA, Friedländer MR, Almlöf J, Sammeth M, Pulyakhina I, Anvar SY, Laros JF, Buermans HP, Karlberg O, Brännvall M; GEUVADIS Consortium; den Dunnen JT, van Ommen GJ, Gut IG, Guigó R, Estivill X, Syvänen AC, Dermitzakis ET, Lappalainen T. 't Hoen PA, et al. Among authors: gut ig. Nat Biotechnol. 2013 Nov;31(11):1015-22. doi: 10.1038/nbt.2702. Epub 2013 Sep 15. Nat Biotechnol. 2013. PMID: 24037425
MetaTrans: an open-source pipeline for metatranscriptomics.
Martinez X, Pozuelo M, Pascal V, Campos D, Gut I, Gut M, Azpiroz F, Guarner F, Manichanh C. Martinez X, et al. Among authors: gut m, gut i. Sci Rep. 2016 May 23;6:26447. doi: 10.1038/srep26447. Sci Rep. 2016. PMID: 27211518 Free PMC article.
Information recovery from low coverage whole-genome bisulfite sequencing.
Libertini E, Heath SC, Hamoudi RA, Gut M, Ziller MJ, Czyz A, Ruotti V, Stunnenberg HG, Frontini M, Ouwehand WH, Meissner A, Gut IG, Beck S. Libertini E, et al. Among authors: gut m, gut ig. Nat Commun. 2016 Jun 27;7:11306. doi: 10.1038/ncomms11306. Nat Commun. 2016. PMID: 27346250 Free PMC article.
Saturation analysis for whole-genome bisulfite sequencing data.
Libertini E, Heath SC, Hamoudi RA, Gut M, Ziller MJ, Herrero J, Czyz A, Ruotti V, Stunnenberg HG, Frontini M, Ouwehand WH, Meissner A, Gut IG, Beck S. Libertini E, et al. Among authors: gut m, gut ig. Nat Biotechnol. 2016 Jul;34(7):691-693. doi: 10.1038/nbt.3524. Epub 2016 Jun 27. Nat Biotechnol. 2016. PMID: 27347755 No abstract available.
Single-cell transcriptome conservation in cryopreserved cells and tissues.
Guillaumet-Adkins A, Rodríguez-Esteban G, Mereu E, Mendez-Lago M, Jaitin DA, Villanueva A, Vidal A, Martinez-Marti A, Felip E, Vivancos A, Keren-Shaul H, Heath S, Gut M, Amit I, Gut I, Heyn H. Guillaumet-Adkins A, et al. Among authors: gut m, gut i. Genome Biol. 2017 Mar 1;18(1):45. doi: 10.1186/s13059-017-1171-9. Genome Biol. 2017. PMID: 28249587 Free PMC article.
347 results