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Guidelines for the optimal design of miRNA-based shRNAs.
Bofill-De Ros X, Gu S. Bofill-De Ros X, et al. Among authors: gu s. Methods. 2016 Jul 1;103:157-66. doi: 10.1016/j.ymeth.2016.04.003. Epub 2016 Apr 12. Methods. 2016. PMID: 27083402 Free PMC article. Review.
Cytoplasmic Drosha activity generated by alternative splicing.
Dai L, Chen K, Youngren B, Kulina J, Yang A, Guo Z, Li J, Yu P, Gu S. Dai L, et al. Among authors: gu s. Nucleic Acids Res. 2016 Dec 1;44(21):10454-10466. doi: 10.1093/nar/gkw668. Epub 2016 Jul 28. Nucleic Acids Res. 2016. PMID: 27471035 Free PMC article.
QuagmiR: a cloud-based application for isomiR big data analytics.
Bofill-De Ros X, Chen K, Chen S, Tesic N, Randjelovic D, Skundric N, Nesic S, Varjacic V, Williams EH, Malhotra R, Jiang M, Gu S. Bofill-De Ros X, et al. Among authors: gu s. Bioinformatics. 2019 May 1;35(9):1576-1578. doi: 10.1093/bioinformatics/bty843. Bioinformatics. 2019. PMID: 30295744 Free PMC article.
Using a novel and flexible searching algorithm designed for the detection and annotation of heterogeneous isomiRs, it permits extensive customization of the query process and reference databases to meet the user 's diverse research needs. AVAILABILITY AND IMPLEMENTATION: Q …
Using a novel and flexible searching algorithm designed for the detection and annotation of heterogeneous isomiRs, it permits extensive cust …
IsomiRs: Expanding the miRNA repression toolbox beyond the seed.
Bofill-De Ros X, Yang A, Gu S. Bofill-De Ros X, et al. Among authors: gu s. Biochim Biophys Acta Gene Regul Mech. 2020 Apr;1863(4):194373. doi: 10.1016/j.bbagrm.2019.03.005. Epub 2019 Apr 4. Biochim Biophys Acta Gene Regul Mech. 2020. PMID: 30953728 Free PMC article. Review.
3' Uridylation Confers miRNAs with Non-canonical Target Repertoires.
Yang A, Bofill-De Ros X, Shao TJ, Jiang M, Li K, Villanueva P, Dai L, Gu S. Yang A, et al. Among authors: gu s. Mol Cell. 2019 Aug 8;75(3):511-522.e4. doi: 10.1016/j.molcel.2019.05.014. Epub 2019 Jun 6. Mol Cell. 2019. PMID: 31178353 Free PMC article.
4,169 results