Gu J - Search Results

1

Artificial-cell-type aware cell-type classification in CITE-seq.

Lian Q, Xin H, Ma J, Konnikova L, Chen W, Gu J, Chen K. Lian Q, et al. Among authors: gu j. Bioinformatics. 2020 Jul 1;36(Suppl_1):i542-i550. doi: 10.1093/bioinformatics/btaa467. Bioinformatics. 2020. PMID: 32657383 Free PMC article.

2

MicroRNA identification based on sequence and structure alignment.

Wang X, Zhang J, Li F, Gu J, He T, Zhang X, Li Y. Wang X, et al. Among authors: gu j. Bioinformatics. 2005 Sep 15;21(18):3610-4. doi: 10.1093/bioinformatics/bti562. Epub 2005 Jun 30. Bioinformatics. 2005. PMID: 15994192

3

Recurrently deregulated lncRNAs in hepatocellular carcinoma.

Yang Y, Chen L, Gu J, Zhang H, Yuan J, Lian Q, Lv G, Wang S, Wu Y, Yang YT, Wang D, Liu Y, Tang J, Luo G, Li Y, Hu L, Sun X, Wang D, Guo M, Xi Q, Xi J, Wang H, Zhang MQ, Lu ZJ. Yang Y, et al. Among authors: gu j. Nat Commun. 2017 Feb 13;8:14421. doi: 10.1038/ncomms14421. Nat Commun. 2017. PMID: 28194035 Free PMC article.

4

Network embedding-based representation learning for single cell RNA-seq data.

Li X, Chen W, Chen Y, Zhang X, Gu J, Zhang MQ. Li X, et al. Among authors: gu j. Nucleic Acids Res. 2017 Nov 2;45(19):e166. doi: 10.1093/nar/gkx750. Nucleic Acids Res. 2017. PMID: 28977434 Free PMC article.

5

HCCDB: A Database of Hepatocellular Carcinoma Expression Atlas.

Lian Q, Wang S, Zhang G, Wang D, Luo G, Tang J, Chen L, Gu J. Lian Q, et al. Among authors: gu j. Genomics Proteomics Bioinformatics. 2018 Aug;16(4):269-275. doi: 10.1016/j.gpb.2018.07.003. Epub 2018 Sep 25. Genomics Proteomics Bioinformatics. 2018. PMID: 30266410 Free PMC article.

6

VASC: Dimension Reduction and Visualization of Single-cell RNA-seq Data by Deep Variational Autoencoder.

Wang D, Gu J. Wang D, et al. Among authors: gu j. Genomics Proteomics Bioinformatics. 2018 Oct;16(5):320-331. doi: 10.1016/j.gpb.2018.08.003. Epub 2018 Dec 18. Genomics Proteomics Bioinformatics. 2018. PMID: 30576740 Free PMC article.

7

Integrative molecular analysis of metastatic hepatocellular carcinoma.

Wang D, Zhu Y, Tang J, Lian Q, Luo G, Wen W, Zhang MQ, Wang H, Chen L, Gu J. Wang D, et al. Among authors: gu j. BMC Med Genomics. 2019 Nov 13;12(1):164. doi: 10.1186/s12920-019-0586-4. BMC Med Genomics. 2019. PMID: 31722693 Free PMC article.

8

Targeted sequencing reveals the mutational landscape responsible for sorafenib therapy in advanced hepatocellular carcinoma.

Tang J, Sui CJ, Wang DF, Lu XY, Luo GJ, Zhao Q, Lian QY, Jeong S, Lin XM, Zhu YJ, Zheng B, Wu R, Wang Q, Liu XL, Liu JF, Xia Q, Wu G, Gu J, Wang HY, Chen L. Tang J, et al. Among authors: gu j. Theranostics. 2020 Apr 6;10(12):5384-5397. doi: 10.7150/thno.41616. eCollection 2020. Theranostics. 2020. PMID: 32373219 Free PMC article.

9

scCancer: a package for automated processing of single-cell RNA-seq data in cancer.

Guo W, Wang D, Wang S, Shan Y, Liu C, Gu J. Guo W, et al. Among authors: gu j. Brief Bioinform. 2021 May 20;22(3):bbaa127. doi: 10.1093/bib/bbaa127. Brief Bioinform. 2021. PMID: 34020534

10

Discovery of a Carbamoyl Phosphate Synthetase 1-Deficient HCC Subtype With Therapeutic Potential Through Integrative Genomic and Experimental Analysis.

Wu T, Luo G, Lian Q, Sui C, Tang J, Zhu Y, Zheng B, Li Z, Zhang Y, Zhang Y, Bao J, Hu J, Shen S, Yang Z, Wu J, Wang K, Zhao Y, Yang S, Wang S, Qiu X, Wang W, Wu X, Wang H, Gu J, Chen L. Wu T, et al. Among authors: gu j. Hepatology. 2021 Dec;74(6):3249-3268. doi: 10.1002/hep.32088. Epub 2021 Oct 11. Hepatology. 2021. PMID: 34343359

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