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Computational modeling and quantitative physiology reveal central parameters for brassinosteroid-regulated early cell physiological processes linked to elongation growth of the Arabidopsis root.
Großeholz R, Wanke F, Rohr L, Glöckner N, Rausch L, Scholl S, Scacchi E, Spazierer AJ, Shabala L, Shabala S, Schumacher K, Kummer U, Harter K. Großeholz R, et al. Elife. 2022 Sep 7;11:e73031. doi: 10.7554/eLife.73031. Elife. 2022. PMID: 36069528 Free PMC article.
All Driven by Energy Demand? Integrative Comparison of Metabolism of Enterococcus faecalis Wildtype and a Glutamine Synthase Mutant.
Loghmani SB, Zitzow E, Koh GCC, Ulmer A, Veith N, Großeholz R, Rossnagel M, Loesch M, Aebersold R, Kreikemeyer B, Fiedler T, Kummer U. Loghmani SB, et al. Among authors: grosseholz r. Microbiol Spectr. 2022 Apr 27;10(2):e0240021. doi: 10.1128/spectrum.02400-21. Epub 2022 Mar 2. Microbiol Spectr. 2022. PMID: 35234500 Free PMC article.
Inferring causal molecular networks: empirical assessment through a community-based effort.
Hill SM, Heiser LM, Cokelaer T, Unger M, Nesser NK, Carlin DE, Zhang Y, Sokolov A, Paull EO, Wong CK, Graim K, Bivol A, Wang H, Zhu F, Afsari B, Danilova LV, Favorov AV, Lee WS, Taylor D, Hu CW, Long BL, Noren DP, Bisberg AJ; HPN-DREAM Consortium; Mills GB, Gray JW, Kellen M, Norman T, Friend S, Qutub AA, Fertig EJ, Guan Y, Song M, Stuart JM, Spellman PT, Koeppl H, Stolovitzky G, Saez-Rodriguez J, Mukherjee S. Hill SM, et al. Nat Methods. 2016 Apr;13(4):310-8. doi: 10.1038/nmeth.3773. Epub 2016 Feb 22. Nat Methods. 2016. PMID: 26901648 Free PMC article.
Using a genome-scale metabolic model of Enterococcus faecalis V583 to assess amino acid uptake and its impact on central metabolism.
Veith N, Solheim M, van Grinsven KW, Olivier BG, Levering J, Grosseholz R, Hugenholtz J, Holo H, Nes I, Teusink B, Kummer U. Veith N, et al. Among authors: grosseholz r. Appl Environ Microbiol. 2015 Mar;81(5):1622-33. doi: 10.1128/AEM.03279-14. Epub 2014 Dec 19. Appl Environ Microbiol. 2015. PMID: 25527553 Free PMC article.