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Large scale genotype- and phenotype-driven machine learning in Von Hippel-Lindau disease.
Chiorean A, Farncombe KM, Delong S, Andric V, Ansar S, Chan C, Clark K, Danos AM, Gao Y, Giles RH, Goldenberg A, Jani P, Krysiak K, Kujan L, Macpherson S, Maher ER, McCoy LG, Salama Y, Saliba J, Sheta L, Griffith M, Griffith OL, Erdman L, Ramani A, Kim RH. Chiorean A, et al. Among authors: griffith ol, griffith m. Hum Mutat. 2022 Sep;43(9):1268-1285. doi: 10.1002/humu.24392. Epub 2022 May 10. Hum Mutat. 2022. PMID: 35475554 Free PMC article.
Informatics for RNA Sequencing: A Web Resource for Analysis on the Cloud.
Griffith M, Walker JR, Spies NC, Ainscough BJ, Griffith OL. Griffith M, et al. Among authors: griffith ol. PLoS Comput Biol. 2015 Aug 6;11(8):e1004393. doi: 10.1371/journal.pcbi.1004393. eCollection 2015 Aug. PLoS Comput Biol. 2015. PMID: 26248053 Free PMC article.
DGIdb 2.0: mining clinically relevant drug-gene interactions.
Wagner AH, Coffman AC, Ainscough BJ, Spies NC, Skidmore ZL, Campbell KM, Krysiak K, Pan D, McMichael JF, Eldred JM, Walker JR, Wilson RK, Mardis ER, Griffith M, Griffith OL. Wagner AH, et al. Among authors: griffith ol, griffith m. Nucleic Acids Res. 2016 Jan 4;44(D1):D1036-44. doi: 10.1093/nar/gkv1165. Epub 2015 Nov 3. Nucleic Acids Res. 2016. PMID: 26531824 Free PMC article.
ORegAnno 3.0: a community-driven resource for curated regulatory annotation.
Lesurf R, Cotto KC, Wang G, Griffith M, Kasaian K, Jones SJ, Montgomery SB, Griffith OL; Open Regulatory Annotation Consortium. Lesurf R, et al. Among authors: griffith ol, griffith m. Nucleic Acids Res. 2016 Jan 4;44(D1):D126-32. doi: 10.1093/nar/gkv1203. Epub 2015 Nov 17. Nucleic Acids Res. 2016. PMID: 26578589 Free PMC article.
Optimizing cancer genome sequencing and analysis.
Griffith M, Miller CA, Griffith OL, Krysiak K, Skidmore ZL, Ramu A, Walker JR, Dang HX, Trani L, Larson DE, Demeter RT, Wendl MC, McMichael JF, Austin RE, Magrini V, McGrath SD, Ly A, Kulkarni S, Cordes MG, Fronick CC, Fulton RS, Maher CA, Ding L, Klco JM, Mardis ER, Ley TJ, Wilson RK. Griffith M, et al. Among authors: griffith ol. Cell Syst. 2015 Sep 23;1(3):210-223. doi: 10.1016/j.cels.2015.08.015. Cell Syst. 2015. PMID: 26645048 Free PMC article.
A genomic case study of mixed fibrolamellar hepatocellular carcinoma.
Griffith OL, Griffith M, Krysiak K, Magrini V, Ramu A, Skidmore ZL, Kunisaki J, Austin R, McGrath S, Zhang J, Demeter R, Graves T, Eldred JM, Walker J, Larson DE, Maher CA, Lin Y, Chapman W, Mahadevan A, Miksad R, Nasser I, Hanto DW, Mardis ER. Griffith OL, et al. Among authors: griffith m. Ann Oncol. 2016 Jun;27(6):1148-1154. doi: 10.1093/annonc/mdw135. Epub 2016 Mar 30. Ann Oncol. 2016. PMID: 27029710 Free PMC article.
A genomic analysis of Philadelphia chromosome-negative AML arising in patients with CML.
Krysiak K, Christopher MJ, Skidmore ZL, Demeter RT, Magrini V, Kunisaki J, O'Laughlin M, Duncavage EJ, Miller CA, Ozenberger BA, Griffith M, Wartman LD, Griffith OL. Krysiak K, et al. Among authors: griffith ol, griffith m. Blood Cancer J. 2016 Apr 8;6(4):e413. doi: 10.1038/bcj.2016.18. Blood Cancer J. 2016. PMID: 27058228 Free PMC article. No abstract available.
GenVisR: Genomic Visualizations in R.
Skidmore ZL, Wagner AH, Lesurf R, Campbell KM, Kunisaki J, Griffith OL, Griffith M. Skidmore ZL, et al. Among authors: griffith ol, griffith m. Bioinformatics. 2016 Oct 1;32(19):3012-4. doi: 10.1093/bioinformatics/btw325. Epub 2016 Jun 10. Bioinformatics. 2016. PMID: 27288499 Free PMC article.
Truncating Prolactin Receptor Mutations Promote Tumor Growth in Murine Estrogen Receptor-Alpha Mammary Carcinomas.
Griffith OL, Chan SR, Griffith M, Krysiak K, Skidmore ZL, Hundal J, Allen JA, Arthur CD, Runci D, Bugatti M, Miceli AP, Schmidt H, Trani L, Kanchi KL, Miller CA, Larson DE, Fulton RS, Vermi W, Wilson RK, Schreiber RD, Mardis ER. Griffith OL, et al. Among authors: griffith m. Cell Rep. 2016 Sep 27;17(1):249-260. doi: 10.1016/j.celrep.2016.08.076. Cell Rep. 2016. PMID: 27681435 Free PMC article.
168 results