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Three crocodilian genomes reveal ancestral patterns of evolution among archosaurs.
Green RE, Braun EL, Armstrong J, Earl D, Nguyen N, Hickey G, Vandewege MW, St John JA, Capella-Gutiérrez S, Castoe TA, Kern C, Fujita MK, Opazo JC, Jurka J, Kojima KK, Caballero J, Hubley RM, Smit AF, Platt RN, Lavoie CA, Ramakodi MP, Finger JW Jr, Suh A, Isberg SR, Miles L, Chong AY, Jaratlerdsiri W, Gongora J, Moran C, Iriarte A, McCormack J, Burgess SC, Edwards SV, Lyons E, Williams C, Breen M, Howard JT, Gresham CR, Peterson DG, Schmitz J, Pollock DD, Haussler D, Triplett EW, Zhang G, Irie N, Jarvis ED, Brochu CA, Schmidt CJ, McCarthy FM, Faircloth BC, Hoffmann FG, Glenn TC, Gabaldón T, Paten B, Ray DA. Green RE, et al. Among authors: gresham cr. Science. 2014 Dec 12;346(6215):1254449. doi: 10.1126/science.1254449. Epub 2014 Dec 11. Science. 2014. PMID: 25504731 Free PMC article.
De novo transcriptome assembly and analyses of gene expression during photomorphogenesis in diploid wheat Triticum monococcum.
Fox SE, Geniza M, Hanumappa M, Naithani S, Sullivan C, Preece J, Tiwari VK, Elser J, Leonard JM, Sage A, Gresham C, Kerhornou A, Bolser D, McCarthy F, Kersey P, Lazo GR, Jaiswal P. Fox SE, et al. Among authors: gresham c. PLoS One. 2014 May 12;9(5):e96855. doi: 10.1371/journal.pone.0096855. eCollection 2014. PLoS One. 2014. PMID: 24821410 Free PMC article.
Chickspress: a resource for chicken gene expression.
McCarthy FM, Pendarvis K, Cooksey AM, Gresham CR, Bomhoff M, Davey S, Lyons E, Sonstegard TS, Bridges SM, Burgess SC. McCarthy FM, et al. Among authors: gresham cr. Database (Oxford). 2019 Jan 1;2019:baz058. doi: 10.1093/database/baz058. Database (Oxford). 2019. PMID: 31210271 Free PMC article.
AgBase: supporting functional modeling in agricultural organisms.
McCarthy FM, Gresham CR, Buza TJ, Chouvarine P, Pillai LR, Kumar R, Ozkan S, Wang H, Manda P, Arick T, Bridges SM, Burgess SC. McCarthy FM, et al. Among authors: gresham cr. Nucleic Acids Res. 2011 Jan;39(Database issue):D497-506. doi: 10.1093/nar/gkq1115. Epub 2010 Nov 12. Nucleic Acids Res. 2011. PMID: 21075795 Free PMC article.
Facilitating functional annotation of chicken microarray data.
Buza TJ, Kumar R, Gresham CR, Burgess SC, McCarthy FM. Buza TJ, et al. Among authors: gresham cr. BMC Bioinformatics. 2009 Oct 8;10 Suppl 11(Suppl 11):S2. doi: 10.1186/1471-2105-10-S11-S2. BMC Bioinformatics. 2009. PMID: 19811685 Free PMC article.
Improved genome assembly of American alligator genome reveals conserved architecture of estrogen signaling.
Rice ES, Kohno S, John JS, Pham S, Howard J, Lareau LF, O'Connell BL, Hickey G, Armstrong J, Deran A, Fiddes I, Platt RN 2nd, Gresham C, McCarthy F, Kern C, Haan D, Phan T, Schmidt C, Sanford JR, Ray DA, Paten B, Guillette LJ Jr, Green RE. Rice ES, et al. Among authors: gresham c. Genome Res. 2017 May;27(5):686-696. doi: 10.1101/gr.213595.116. Epub 2017 Jan 30. Genome Res. 2017. PMID: 28137821 Free PMC article.
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