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The SEQC2 epigenomics quality control (EpiQC) study.
Foox J, Nordlund J, Lalancette C, Gong T, Lacey M, Lent S, Langhorst BW, Ponnaluri VKC, Williams L, Padmanabhan KR, Cavalcante R, Lundmark A, Butler D, Mozsary C, Gurvitch J, Greally JM, Suzuki M, Menor M, Nasu M, Alonso A, Sheridan C, Scherer A, Bruinsma S, Golda G, Muszynska A, Łabaj PP, Campbell MA, Wos F, Raine A, Liljedahl U, Axelsson T, Wang C, Chen Z, Yang Z, Li J, Yang X, Wang H, Melnick A, Guo S, Blume A, Franke V, Ibanez de Caceres I, Rodriguez-Antolin C, Rosas R, Davis JW, Ishii J, Megherbi DB, Xiao W, Liao W, Xu J, Hong H, Ning B, Tong W, Akalin A, Wang Y, Deng Y, Mason CE. Foox J, et al. Among authors: greally jm. Genome Biol. 2021 Dec 6;22(1):332. doi: 10.1186/s13059-021-02529-2. Genome Biol. 2021. PMID: 34872606 Free PMC article.
Comparative isoschizomer profiling of cytosine methylation: the HELP assay.
Khulan B, Thompson RF, Ye K, Fazzari MJ, Suzuki M, Stasiek E, Figueroa ME, Glass JL, Chen Q, Montagna C, Hatchwell E, Selzer RR, Richmond TA, Green RD, Melnick A, Greally JM. Khulan B, et al. Among authors: greally jm. Genome Res. 2006 Aug;16(8):1046-55. doi: 10.1101/gr.5273806. Epub 2006 Jun 29. Genome Res. 2006. PMID: 16809668 Free PMC article.
CG dinucleotide clustering is a species-specific property of the genome.
Glass JL, Thompson RF, Khulan B, Figueroa ME, Olivier EN, Oakley EJ, Van Zant G, Bouhassira EE, Melnick A, Golden A, Fazzari MJ, Greally JM. Glass JL, et al. Among authors: greally jm. Nucleic Acids Res. 2007;35(20):6798-807. doi: 10.1093/nar/gkm489. Epub 2007 Oct 10. Nucleic Acids Res. 2007. PMID: 17932072 Free PMC article.
Reduced-representation methylation mapping.
Jeddeloh JA, Greally JM, Rando OJ. Jeddeloh JA, et al. Among authors: greally jm. Genome Biol. 2008;9(8):231. doi: 10.1186/gb-2008-9-8-231. Epub 2008 Sep 1. Genome Biol. 2008. PMID: 18771577 Free PMC article. Review.
High-resolution genome-wide cytosine methylation profiling with simultaneous copy number analysis and optimization for limited cell numbers.
Oda M, Glass JL, Thompson RF, Mo Y, Olivier EN, Figueroa ME, Selzer RR, Richmond TA, Zhang X, Dannenberg L, Green RD, Melnick A, Hatchwell E, Bouhassira EE, Verma A, Suzuki M, Greally JM. Oda M, et al. Among authors: greally jm. Nucleic Acids Res. 2009 Jul;37(12):3829-39. doi: 10.1093/nar/gkp260. Epub 2009 Apr 22. Nucleic Acids Res. 2009. PMID: 19386619 Free PMC article.
213 results