Gräwe C - Search Results

1

PPARγ lipodystrophy mutants reveal intermolecular interactions required for enhancer activation.

Madsen MS, Broekema MF, Madsen MR, Koppen A, Borgman A, Gräwe C, Thomsen EGK, Westland D, Kranendonk MEG, Koerkamp MG, Hamers N, Bonvin AMJJ, Pittol JMR, Natarajan KN, Kersten S, Holstege FCP, Monajemi H, van Mil SWC, Vermeulen M, Kragelund BB, Cassiman D, Mandrup S, Kalkhoven E. Madsen MS, et al. Among authors: grawe c. Nat Commun. 2022 Nov 19;13(1):7090. doi: 10.1038/s41467-022-34766-9. Nat Commun. 2022. PMID: 36402763 Free PMC article.

2

Global profiling of protein-DNA and protein-nucleosome binding affinities using quantitative mass spectrometry.

Makowski MM, Gräwe C, Foster BM, Nguyen NV, Bartke T, Vermeulen M. Makowski MM, et al. Among authors: grawe c. Nat Commun. 2018 Apr 25;9(1):1653. doi: 10.1038/s41467-018-04084-0. Nat Commun. 2018. PMID: 29695722 Free PMC article.

3

PAQMAN: Protein-nucleic acid affinity quantification by MAss spectrometry in nuclear extracts.

Gräwe C, Makowski MM, Vermeulen M. Gräwe C, et al. Methods. 2020 Dec 1;184:70-77. doi: 10.1016/j.ymeth.2019.12.003. Epub 2019 Dec 16. Methods. 2020. PMID: 31857188

4

Massively parallel reporter assays of melanoma risk variants identify MX2 as a gene promoting melanoma.

Choi J, Zhang T, Vu A, Ablain J, Makowski MM, Colli LM, Xu M, Hennessey RC, Yin J, Rothschild H, Gräwe C, Kovacs MA, Funderburk KM, Brossard M, Taylor J, Pasaniuc B, Chari R, Chanock SJ, Hoggart CJ, Demenais F, Barrett JH, Law MH, Iles MM, Yu K, Vermeulen M, Zon LI, Brown KM. Choi J, et al. Among authors: grawe c. Nat Commun. 2020 Jun 1;11(1):2718. doi: 10.1038/s41467-020-16590-1. Nat Commun. 2020. PMID: 32483191 Free PMC article.

5

Cross-linking mass spectrometry reveals the structural topology of peripheral NuRD subunits relative to the core complex.

Spruijt CG, Gräwe C, Kleinendorst SC, Baltissen MPA, Vermeulen M. Spruijt CG, et al. Among authors: grawe c. FEBS J. 2021 May;288(10):3231-3245. doi: 10.1111/febs.15650. Epub 2020 Dec 14. FEBS J. 2021. PMID: 33283408 Free PMC article.

6

RNA-Centric Methods: Toward the Interactome of Specific RNA Transcripts.

Gräwe C, Stelloo S, van Hout FAH, Vermeulen M. Gräwe C, et al. Trends Biotechnol. 2021 Sep;39(9):890-900. doi: 10.1016/j.tibtech.2020.11.011. Epub 2020 Dec 19. Trends Biotechnol. 2021. PMID: 33353763 Free article. Review.

7

BANP opens chromatin and activates CpG-island-regulated genes.

Grand RS, Burger L, Gräwe C, Michael AK, Isbel L, Hess D, Hoerner L, Iesmantavicius V, Durdu S, Pregnolato M, Krebs AR, Smallwood SA, Thomä N, Vermeulen M, Schübeler D. Grand RS, et al. Among authors: grawe c. Nature. 2021 Aug;596(7870):133-137. doi: 10.1038/s41586-021-03689-8. Epub 2021 Jul 7. Nature. 2021. PMID: 34234345

8

Quantification of absolute transcription factor binding affinities in the native chromatin context using BANC-seq.

Neikes HK, Kliza KW, Gräwe C, Wester RA, Jansen PWTC, Lamers LA, Baltissen MP, van Heeringen SJ, Logie C, Teichmann SA, Lindeboom RGH, Vermeulen M. Neikes HK, et al. Among authors: grawe c. Nat Biotechnol. 2023 Dec;41(12):1801-1809. doi: 10.1038/s41587-023-01715-w. Epub 2023 Mar 27. Nat Biotechnol. 2023. PMID: 36973556

9

Determining DNA-Protein Binding Affinities and Specificities from Crude Lysates Using a Combined SILAC/TMT Labeling Strategy.

Gräwe C, Hernandez-Quiles M, Jansen PWTC, Brimmers A, Vermeulen M. Gräwe C, et al. J Proteome Res. 2023 Aug 4;22(8):2683-2693. doi: 10.1021/acs.jproteome.3c00248. Epub 2023 Jul 19. J Proteome Res. 2023. PMID: 37466164 Free PMC article.

10

Policy driven changes in animal research practices: mapping researchers' attitudes towards animal-free innovations using the Netherlands as an example.

Bressers S, van den Elzen H, Gräwe C, van den Oetelaar D, Postma PHA, Schoustra SK. Bressers S, et al. Among authors: grawe c. Res Integr Peer Rev. 2019 Apr 23;4:8. doi: 10.1186/s41073-019-0067-5. eCollection 2019. Res Integr Peer Rev. 2019. PMID: 31024742 Free PMC article.

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