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139 results

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Page 1
Macromolecular modeling and design in Rosetta: recent methods and frameworks.
Leman JK, Weitzner BD, Lewis SM, Adolf-Bryfogle J, Alam N, Alford RF, Aprahamian M, Baker D, Barlow KA, Barth P, Basanta B, Bender BJ, Blacklock K, Bonet J, Boyken SE, Bradley P, Bystroff C, Conway P, Cooper S, Correia BE, Coventry B, Das R, De Jong RM, DiMaio F, Dsilva L, Dunbrack R, Ford AS, Frenz B, Fu DY, Geniesse C, Goldschmidt L, Gowthaman R, Gray JJ, Gront D, Guffy S, Horowitz S, Huang PS, Huber T, Jacobs TM, Jeliazkov JR, Johnson DK, Kappel K, Karanicolas J, Khakzad H, Khar KR, Khare SD, Khatib F, Khramushin A, King IC, Kleffner R, Koepnick B, Kortemme T, Kuenze G, Kuhlman B, Kuroda D, Labonte JW, Lai JK, Lapidoth G, Leaver-Fay A, Lindert S, Linsky T, London N, Lubin JH, Lyskov S, Maguire J, Malmström L, Marcos E, Marcu O, Marze NA, Meiler J, Moretti R, Mulligan VK, Nerli S, Norn C, Ó'Conchúir S, Ollikainen N, Ovchinnikov S, Pacella MS, Pan X, Park H, Pavlovicz RE, Pethe M, Pierce BG, Pilla KB, Raveh B, Renfrew PD, Burman SSR, Rubenstein A, Sauer MF, Scheck A, Schief W, Schueler-Furman O, Sedan Y, Sevy AM, Sgourakis NG, Shi L, Siegel JB, Silva DA, Smith S, Song Y, Stein A, Szegedy M, Teets FD, Thyme SB, Wang RY, Watkins A, Zimmerman L, Bonneau R. Leman JK, et al. Among authors: goldschmidt l. Nat Methods. 2020 Jul;17(7):665-680. doi: 10.1038/s41592-020-0848-2. Epub 2020 Jun 1. Nat Methods. 2020. PMID: 32483333 Free PMC article. Review.
Fast docking on graphics processing units via Ray-Casting.
Khar KR, Goldschmidt L, Karanicolas J. Khar KR, et al. Among authors: goldschmidt l. PLoS One. 2013 Aug 16;8(8):e70661. doi: 10.1371/journal.pone.0070661. eCollection 2013. PLoS One. 2013. PMID: 23976948 Free PMC article.
Cooperative hydrogen bonding in amyloid formation.
Tsemekhman K, Goldschmidt L, Eisenberg D, Baker D. Tsemekhman K, et al. Among authors: goldschmidt l. Protein Sci. 2007 Apr;16(4):761-4. doi: 10.1110/ps.062609607. Epub 2007 Feb 27. Protein Sci. 2007. PMID: 17327394 Free PMC article.
Sub-ångström cryo-EM structure of a prion protofibril reveals a polar clasp.
Gallagher-Jones M, Glynn C, Boyer DR, Martynowycz MW, Hernandez E, Miao J, Zee CT, Novikova IV, Goldschmidt L, McFarlane HT, Helguera GF, Evans JE, Sawaya MR, Cascio D, Eisenberg DS, Gonen T, Rodriguez JA. Gallagher-Jones M, et al. Among authors: goldschmidt l. Nat Struct Mol Biol. 2018 Feb;25(2):131-134. doi: 10.1038/s41594-017-0018-0. Epub 2018 Jan 15. Nat Struct Mol Biol. 2018. PMID: 29335561 Free PMC article.
Structure and folding of a designed knotted protein.
King NP, Jacobitz AW, Sawaya MR, Goldschmidt L, Yeates TO. King NP, et al. Among authors: goldschmidt l. Proc Natl Acad Sci U S A. 2010 Nov 30;107(48):20732-7. doi: 10.1073/pnas.1007602107. Epub 2010 Nov 10. Proc Natl Acad Sci U S A. 2010. PMID: 21068371 Free PMC article.
Molecular basis for amyloid-beta polymorphism.
Colletier JP, Laganowsky A, Landau M, Zhao M, Soriaga AB, Goldschmidt L, Flot D, Cascio D, Sawaya MR, Eisenberg D. Colletier JP, et al. Among authors: goldschmidt l. Proc Natl Acad Sci U S A. 2011 Oct 11;108(41):16938-43. doi: 10.1073/pnas.1112600108. Epub 2011 Sep 23. Proc Natl Acad Sci U S A. 2011. PMID: 21949245 Free PMC article.
139 results