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Combinatorial QSAR modeling of P-glycoprotein substrates.
de Cerqueira Lima P, Golbraikh A, Oloff S, Xiao Y, Tropsha A. de Cerqueira Lima P, et al. Among authors: golbraikh a. J Chem Inf Model. 2006 May-Jun;46(3):1245-54. doi: 10.1021/ci0504317. J Chem Inf Model. 2006. PMID: 16711744
Recently, we have begun to explore a combinatorial QSAR approach which employs various combinations of optimization methods and descriptor types and includes rigorous and consistent model validation (Kovatcheva, A.; Golbraikh, A.; Oloff, S.; Xiao, Y.; …
Recently, we have begun to explore a combinatorial QSAR approach which employs various combinations of optimization methods and descr …
Novel ZE-isomerism descriptors derived from molecular topology and their application to QSAR analysis.
Golbraikh A, Bonchev D, Tropsha A. Golbraikh A, et al. J Chem Inf Comput Sci. 2002 Jul-Aug;42(4):769-87. doi: 10.1021/ci0103469. J Chem Inf Comput Sci. 2002. PMID: 12132878
This approach is similar to the one described previously for topological chirality descriptors (Golbraikh, A., et al. J. Chem. Inf. Comput. Sci. 2001, 41, 147-158). ...The applicability of ZE-isomerism descriptors to QSAR analysis is demonstrated in the studies of …
This approach is similar to the one described previously for topological chirality descriptors (Golbraikh, A., et al. J. Chem. …
Predictive QSAR modeling based on diversity sampling of experimental datasets for the training and test set selection.
Golbraikh A, Tropsha A. Golbraikh A, et al. J Comput Aided Mol Des. 2002 May-Jun;16(5-6):357-69. doi: 10.1023/a:1020869118689. J Comput Aided Mol Des. 2002. PMID: 12489684
One of the most important characteristics of Quantitative Structure Activity Relashionships (QSAR) models is their predictive power. The latter can be defined as the ability of a model to predict accurately the target property (e.g., biological activity) of compounds that …
One of the most important characteristics of Quantitative Structure Activity Relashionships (QSAR) models is their predictive power. The lat …
QSAR modeling using chirality descriptors derived from molecular topology.
Golbraikh A, Tropsha A. Golbraikh A, et al. J Chem Inf Comput Sci. 2003 Jan-Feb;43(1):144-54. doi: 10.1021/ci025516b. J Chem Inf Comput Sci. 2003. PMID: 12546547
To circumvent this problem, we recently introduced chirality descriptors derived from molecular graphs and applied them in QSAR studies of ecdysteroids (Golbraikh A.; Bonchev, D.; Tropsha, A. J. Chem. Inf. Comput. Sci. 2001,41, 147-158). ...The results presen …
To circumvent this problem, we recently introduced chirality descriptors derived from molecular graphs and applied them in QSAR studies of e …
Predictive QSAR modeling based on diversity sampling of experimental datasets for the training and test set selection.
Golbraikh A, Tropsha A. Golbraikh A, et al. Mol Divers. 2002;5(4):231-43. doi: 10.1023/a:1021372108686. Mol Divers. 2002. PMID: 12549674
One of the most important characteristics of Quantitative Structure Activity Relashionships (QSAR) models is their predictive power. The latter can be defined as the ability of a model to predict accurately the target property (e.g., biological activity) of compounds that …
One of the most important characteristics of Quantitative Structure Activity Relashionships (QSAR) models is their predictive power. The lat …
Rational selection of training and test sets for the development of validated QSAR models.
Golbraikh A, Shen M, Xiao Z, Xiao YD, Lee KH, Tropsha A. Golbraikh A, et al. J Comput Aided Mol Des. 2003 Feb-Apr;17(2-4):241-53. doi: 10.1023/a:1025386326946. J Comput Aided Mol Des. 2003. PMID: 13677490
Using k nearest neighbors (kNN) variable selection QSAR method for the analysis of several datasets, we have demonstrated recently that the widely accepted leave-one-out (LOO) cross-validated R2 (q2) is an inadequate characteristic to assess the predictive ability of the models [ …
Using k nearest neighbors (kNN) variable selection QSAR method for the analysis of several datasets, we have demonstrated recently that the …
Combinatorial QSAR of ambergris fragrance compounds.
Kovatcheva A, Golbraikh A, Oloff S, Xiao YD, Zheng W, Wolschann P, Buchbauer G, Tropsha A. Kovatcheva A, et al. Among authors: golbraikh a. J Chem Inf Comput Sci. 2004 Mar-Apr;44(2):582-95. doi: 10.1021/ci034203t. J Chem Inf Comput Sci. 2004. PMID: 15032539
A combinatorial quantitative structure-activity relationships (Combi-QSAR) approach has been developed and applied to a data set of 98 ambergris fragrance compounds with complex stereochemistry. ...Seven different descriptor collections were generated with commercia
A combinatorial quantitative structure-activity relationships (Combi-QSAR) approach has been developed and applied to a data s
42 results