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gsufsort: constructing suffix arrays, LCP arrays and BWTs for string collections.
Algorithms Mol Biol. 2020 Sep 22;15:18. doi: 10.1186/s13015-020-00177-y. eCollection 2020.
Algorithms Mol Biol. 2020.
PMID: 32973918
Free PMC article.
String search experimentation using massive data.
Moffat A, Gog S.
Moffat A, et al. Among authors: gog s.
Philos Trans A Math Phys Eng Sci. 2014 Apr 21;372(2016):20130135. doi: 10.1098/rsta.2013.0135. Print 2014 May 28.
Philos Trans A Math Phys Eng Sci. 2014.
PMID: 24751869
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Fast algorithms for transforming back and forth between a signed permutation and its equivalent simple permutation.
Gog S, Bader M.
Gog S, et al.
J Comput Biol. 2008 Oct;15(8):1029-41. doi: 10.1089/cmb.2008.0040.
J Comput Biol. 2008.
PMID: 18781831
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GENESIS: genome evolution scenarios.
Gog S, Bader M, Ohlebusch E.
Gog S, et al.
Bioinformatics. 2008 Mar 1;24(5):711-2. doi: 10.1093/bioinformatics/btn026. Epub 2008 Jan 19.
Bioinformatics. 2008.
PMID: 18204053
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