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Page 1
A compendium of genetic regulatory effects across pig tissues.
Teng J, Gao Y, Yin H, Bai Z, Liu S, Zeng H; PigGTEx Consortium; Bai L, Cai Z, Zhao B, Li X, Xu Z, Lin Q, Pan Z, Yang W, Yu X, Guan D, Hou Y, Keel BN, Rohrer GA, Lindholm-Perry AK, Oliver WT, Ballester M, Crespo-Piazuelo D, Quintanilla R, Canela-Xandri O, Rawlik K, Xia C, Yao Y, Zhao Q, Yao W, Yang L, Li H, Zhang H, Liao W, Chen T, Karlskov-Mortensen P, Fredholm M, Amills M, Clop A, Giuffra E, Wu J, Cai X, Diao S, Pan X, Wei C, Li J, Cheng H, Wang S, Su G, Sahana G, Lund MS, Dekkers JCM, Kramer L, Tuggle CK, Corbett R, Groenen MAM, Madsen O, Gòdia M, Rocha D, Charles M, Li CJ, Pausch H, Hu X, Frantz L, Luo Y, Lin L, Zhou Z, Zhang Z, Chen Z, Cui L, Xiang R, Shen X, Li P, Huang R, Tang G, Li M, Zhao Y, Yi G, Tang Z, Jiang J, Zhao F, Yuan X, Liu X, Chen Y, Xu X, Zhao S, Zhao P, Haley C, Zhou H, Wang Q, Pan Y, Ding X, Ma L, Li J, Navarro P, Zhang Q, Li B, Tenesa A, Li K, Liu GE, Zhang Z, Fang L. Teng J, et al. Among authors: giuffra e. Nat Genet. 2024 Jan;56(1):112-123. doi: 10.1038/s41588-023-01585-7. Epub 2024 Jan 4. Nat Genet. 2024. PMID: 38177344 Free PMC article.
Editorial: Functional Annotation of Animal Genomes.
Chamberlain AJ, Cheng HH, Giuffra E, Kuehn C, Tuggle CK, Zhou H. Chamberlain AJ, et al. Among authors: giuffra e. Front Genet. 2021 Oct 15;12:768626. doi: 10.3389/fgene.2021.768626. eCollection 2021. Front Genet. 2021. PMID: 34721550 Free PMC article. No abstract available.
RNA-Seq Data for Reliable SNP Detection and Genotype Calling: Interest for Coding Variant Characterization and Cis-Regulation Analysis by Allele-Specific Expression in Livestock Species.
Jehl F, Degalez F, Bernard M, Lecerf F, Lagoutte L, Désert C, Coulée M, Bouchez O, Leroux S, Abasht B, Tixier-Boichard M, Bed'hom B, Burlot T, Gourichon D, Bardou P, Acloque H, Foissac S, Djebali S, Giuffra E, Zerjal T, Pitel F, Klopp C, Lagarrigue S. Jehl F, et al. Among authors: giuffra e. Front Genet. 2021 Jun 28;12:655707. doi: 10.3389/fgene.2021.655707. eCollection 2021. Front Genet. 2021. PMID: 34262593 Free PMC article.
Tissue Resources for the Functional Annotation of Animal Genomes.
Tixier-Boichard M, Fabre S, Dhorne-Pollet S, Goubil A, Acloque H, Vincent-Naulleau S, Ross P, Wang Y, Chanthavixay G, Cheng H, Ernst C, Leesburg V, Giuffra E, Zhou H; Collaborative Working Group. Tixier-Boichard M, et al. Among authors: giuffra e. Front Genet. 2021 Jun 21;12:666265. doi: 10.3389/fgene.2021.666265. eCollection 2021. Front Genet. 2021. PMID: 34234809 Free PMC article.
Author Correction: An integrative atlas of chicken long non-coding genes and their annotations across 25 tissues.
Jehl F, Muret K, Bernard M, Boutin M, Lagoutte L, Désert C, Dehais P, Esquerré D, Acloque H, Giuffra E, Djebali S, Foissac S, Derrien T, Pitel F, Zerjal T, Klopp C, Lagarrigue S. Jehl F, et al. Among authors: giuffra e. Sci Rep. 2021 Apr 28;11(1):9463. doi: 10.1038/s41598-021-89158-8. Sci Rep. 2021. PMID: 33911173 Free PMC article. No abstract available.
Intestinal organoids in farm animals.
Beaumont M, Blanc F, Cherbuy C, Egidy G, Giuffra E, Lacroix-Lamandé S, Wiedemann A. Beaumont M, et al. Among authors: giuffra e. Vet Res. 2021 Feb 25;52(1):33. doi: 10.1186/s13567-021-00909-x. Vet Res. 2021. PMID: 33632315 Free PMC article. Review.
Distinctive Cellular and Metabolic Reprogramming in Porcine Lung Mononuclear Phagocytes Infected With Type 1 PRRSV Strains.
Crisci E, Moroldo M, Vu Manh TP, Mohammad A, Jourdren L, Urien C, Bouguyon E, Bordet E, Bevilacqua C, Bourge M, Pezant J, Pléau A, Boulesteix O, Schwartz I, Bertho N, Giuffra E. Crisci E, et al. Among authors: giuffra e. Front Immunol. 2020 Dec 7;11:588411. doi: 10.3389/fimmu.2020.588411. eCollection 2020. Front Immunol. 2020. PMID: 33365028 Free PMC article.
From FAANG to fork: application of highly annotated genomes to improve farmed animal production.
Clark EL, Archibald AL, Daetwyler HD, Groenen MAM, Harrison PW, Houston RD, Kühn C, Lien S, Macqueen DJ, Reecy JM, Robledo D, Watson M, Tuggle CK, Giuffra E. Clark EL, et al. Among authors: giuffra e. Genome Biol. 2020 Nov 24;21(1):285. doi: 10.1186/s13059-020-02197-8. Genome Biol. 2020. PMID: 33234160 Free PMC article. Review. No abstract available.
62 results