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A pangenome graph reference of 30 chicken genomes allows genotyping of large and complex structural variants.
Rice ES, Alberdi A, Alfieri J, Athrey G, Balacco JR, Bardou P, Blackmon H, Charles M, Cheng HH, Fedrigo O, Fiddaman SR, Formenti G, Frantz LAF, Gilbert MTP, Hearn CJ, Jarvis ED, Klopp C, Marcos S, Mason AS, Velez-Irizarry D, Xu L, Warren WC. Rice ES, et al. Among authors: gilbert mtp. BMC Biol. 2023 Nov 22;21(1):267. doi: 10.1186/s12915-023-01758-0. BMC Biol. 2023. PMID: 37993882 Free PMC article.
How genomics can help biodiversity conservation.
Theissinger K, Fernandes C, Formenti G, Bista I, Berg PR, Bleidorn C, Bombarely A, Crottini A, Gallo GR, Godoy JA, Jentoft S, Malukiewicz J, Mouton A, Oomen RA, Paez S, Palsbøll PJ, Pampoulie C, Ruiz-López MJ, Secomandi S, Svardal H, Theofanopoulou C, de Vries J, Waldvogel AM, Zhang G, Jarvis ED, Bálint M, Ciofi C, Waterhouse RM, Mazzoni CJ, Höglund J; European Reference Genome Atlas Consortium. Theissinger K, et al. Trends Genet. 2023 Jul;39(7):545-559. doi: 10.1016/j.tig.2023.01.005. Epub 2023 Feb 16. Trends Genet. 2023. PMID: 36801111 Free article. Review.
Unravelling animal-microbiota evolution on a chip.
Aizpurua O, Blijleven K, Trivedi U, Gilbert MTP, Alberdi A. Aizpurua O, et al. Among authors: gilbert mtp. Trends Microbiol. 2023 Oct;31(10):995-1002. doi: 10.1016/j.tim.2023.04.010. Epub 2023 May 20. Trends Microbiol. 2023. PMID: 37217368 Review.
Enriching captivity conditions with natural elements does not prevent the loss of wild-like gut microbiota but shapes its compositional variation in two small mammals.
Koziol A, Odriozola I, Nyholm L, Leonard A, San José C, Pauperio J, Ferreira C, Hansen AJ, Aizpurua O, Gilbert MTP, Alberdi A. Koziol A, et al. Among authors: gilbert mtp. Microbiologyopen. 2022 Oct;11(5):e1318. doi: 10.1002/mbo3.1318. Microbiologyopen. 2022. PMID: 36314753 Free PMC article.
Genomics of adaptive evolution in the woolly mammoth.
Díez-Del-Molino D, Dehasque M, Chacón-Duque JC, Pečnerová P, Tikhonov A, Protopopov A, Plotnikov V, Kanellidou F, Nikolskiy P, Mortensen P, Danilov GK, Vartanyan S, Gilbert MTP, Lister AM, Heintzman PD, van der Valk T, Dalén L. Díez-Del-Molino D, et al. Among authors: gilbert mtp. Curr Biol. 2023 May 8;33(9):1753-1764.e4. doi: 10.1016/j.cub.2023.03.084. Epub 2023 Apr 7. Curr Biol. 2023. PMID: 37030294 Free article.
The extinct Sicilian wolf shows a complex history of isolation and admixture with ancient dogs.
Ciucani MM, Ramos-Madrigal J, Hernández-Alonso G, Carmagnini A, Aninta SG, Sun X, Scharff-Olsen CH, Lanigan LT, Fracasso I, Clausen CG, Aspi J, Kojola I, Baltrūnaitė L, Balčiauskas L, Moore J, Åkesson M, Saarma U, Hindrikson M, Hulva P, Bolfíková BČ, Nowak C, Godinho R, Smith S, Paule L, Nowak S, Mysłajek RW, Lo Brutto S, Ciucci P, Boitani L, Vernesi C, Stenøien HK, Smith O, Frantz L, Rossi L, Angelici FM, Cilli E, Sinding MS, Gilbert MTP, Gopalakrishnan S. Ciucani MM, et al. Among authors: gilbert mtp. iScience. 2023 Jul 10;26(8):107307. doi: 10.1016/j.isci.2023.107307. eCollection 2023 Aug 18. iScience. 2023. PMID: 37559898 Free PMC article.
Genomic diversity and differentiation between island and mainland populations of white-tailed eagles (Haliaeetus albicilla).
Hansen CCR, Láruson ÁJ, Rasmussen JA, Ballesteros JAC, Sinding MS, Hallgrimsson GT, von Schmalensee M, Stefansson RA, Skarphédinsson KH, Labansen AL, Leivits M, Sonne C, Dietz R, Skelmose K, Boertmann D, Eulaers I, Martin MD, Helgason AS, Gilbert MTP, Pálsson S. Hansen CCR, et al. Among authors: gilbert mtp. Mol Ecol. 2023 Apr;32(8):1925-1942. doi: 10.1111/mec.16858. Epub 2023 Feb 2. Mol Ecol. 2023. PMID: 36680370
378 results