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Exploring the inhibitory potential of in silico-designed small peptides on Helicobacter pylori Hp0231 (DsbK), a periplasmic oxidoreductase involved in disulfide bond formation.
Roszczenko-Jasińska P, Giełdoń A, Mazur D, Spodzieja M, Plichta M, Czaplewski C, Bal W, Jagusztyn-Krynicka EK, Bartosik D. Roszczenko-Jasińska P, et al. Among authors: gieldon a. Front Mol Biosci. 2024 Jan 11;10:1335704. doi: 10.3389/fmolb.2023.1335704. eCollection 2023. Front Mol Biosci. 2024. PMID: 38274095 Free PMC article.
Impact of selected amino acids of HP0377 (Helicobacter pylori thiol oxidoreductase) on its functioning as a CcmG (cytochrome c maturation) protein and Dsb (disulfide bond) isomerase.
Grzeszczuk MJ, Bąk A, Banaś AM, Urbanowicz P, Dunin-Horkawicz S, Gieldon A, Czaplewski C, Liwo A, Jagusztyn-Krynicka EK. Grzeszczuk MJ, et al. Among authors: gieldon a. PLoS One. 2018 Apr 20;13(4):e0195358. doi: 10.1371/journal.pone.0195358. eCollection 2018. PLoS One. 2018. PMID: 29677198 Free PMC article.
Polymerization of chloro-p-xylylenes, quantum-chemical study.
Czaplewski C, Smalara K, Giełdoń A, Bobrowski M. Czaplewski C, et al. Among authors: gieldon a. J Mol Model. 2017 Feb;23(2):40. doi: 10.1007/s00894-016-3179-6. Epub 2017 Jan 24. J Mol Model. 2017. PMID: 28120123 Free PMC article.
Use of the UNRES force field in template-assisted prediction of protein structures and the refinement of server models: Test with CASP12 targets.
Karczyńska A, Mozolewska MA, Krupa P, Giełdoń A, Bojarski KK, Zaborowski B, Liwo A, Ślusarz R, Ślusarz M, Lee J, Joo K, Czaplewski C. Karczyńska A, et al. Among authors: gieldon a. J Mol Graph Model. 2018 Aug;83:92-99. doi: 10.1016/j.jmgm.2018.05.008. Epub 2018 May 24. J Mol Graph Model. 2018. PMID: 29860162
Scale-consistent approach to the derivation of coarse-grained force fields for simulating structure, dynamics, and thermodynamics of biopolymers.
Liwo A, Czaplewski C, Sieradzan AK, Lubecka EA, Lipska AG, Golon Ł, Karczyńska A, Krupa P, Mozolewska MA, Makowski M, Ganzynkowicz R, Giełdoń A, Maciejczyk M. Liwo A, et al. Among authors: gieldon a. Prog Mol Biol Transl Sci. 2020;170:73-122. doi: 10.1016/bs.pmbts.2019.12.004. Epub 2020 Feb 24. Prog Mol Biol Transl Sci. 2020. PMID: 32145953
54 results