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An Oxford Nanopore Technology-Based Hepatitis B Virus Sequencing Protocol Suitable For Genomic Surveillance Within Clinical Diagnostic Settings.
Tshiabuila D, Choga W, James SE, Maponga T, Preiser W, van Zyl G, Moir M, van Wyk S, Giandhari J, Pillay S, Anyaneji UJ, Lessells RJ, Naidoo Y, Sanko TJ, Wilkinson E, Tegally H, Baxter C, Martin DP, de Oliveira T. Tshiabuila D, et al. Among authors: giandhari j. medRxiv [Preprint]. 2024 Jan 25:2024.01.19.24301519. doi: 10.1101/2024.01.19.24301519. medRxiv. 2024. PMID: 38293032 Free PMC article. Preprint.
Virologic Nonsuppression and HIV Drug Resistance Among People Who Inject Drugs and Their Sexual and Injecting Partners in Kenya.
Chohan BH, Kingston H, Tseng AS, Sambai B, Guthrie BL, Wilkinson E, Giandhari J, Mbogo LW, Monroe-Wise A, Masyuko S, Bosire R, Ludwig-Barron NT, Sinkele W, Bukusi D, de Oliveria T, Farquhar C, Herbeck JT. Chohan BH, et al. Among authors: giandhari j. AIDS Res Hum Retroviruses. 2024 Jan 9. doi: 10.1089/AID.2023.0068. Online ahead of print. AIDS Res Hum Retroviruses. 2024. PMID: 38063008
An emerging clade of Chikungunya West African genotype discovered in real-time during 2023 outbreak in Senegal.
Padane A, Tegally H, Ramphal Y, Seyni N, Sarr M, Diop MM, Diedhiou CK, Mboup A, Diouf ND, Souaré A, Diagne ND, Aza-Gnandji M, Dabo NA, Dia YA, Diaw NA, Leye N, Diaw PA, Ahouidi A, Cissé B, Diallo AS, Diop O, Diallo AA, Ndoye S, Sanko TJ, Baxter C, Wilkinson E, San JE, Tshabuila D, Naidoo Y, Pillay S, Lessells R, Cissé K, Leye A, Mbaye KA, Kania D, Tinto B, Traoré I, Kagone ST, Ouedraogo AS, Gifford RJ, Lourenço J, Giovanetti M, Giandhari J, de Oliveira T, Mboup S. Padane A, et al. Among authors: giandhari j. medRxiv [Preprint]. 2023 Nov 15:2023.11.14.23298527. doi: 10.1101/2023.11.14.23298527. medRxiv. 2023. PMID: 38014099 Free PMC article. Preprint.
Insights into SARS-CoV-2 in Angola during the COVID-19 peak: Molecular epidemiology and genome surveillance.
Francisco NM, van Wyk S, Moir M, San JE, Sebastião CS, Tegally H, Xavier J, Maharaj A, Neto Z, Afonso P, Jandondo D, Paixão J, Miranda J, David K, Inglês L, Pereira A, Paulo A, Carralero RR, Freitas HR, Mufinda F, Lutucuta S, Ghafari M, Giovanetti M, Giandhari J, Pillay S, Naidoo Y, Singh L, Tshiabuila D, Martin DP, Chabuka L, Choga W, Wanjohi D, Mwangi S, Pillay Y, Kebede Y, Shumba E, Ondoa P, Baxter C, Wilkinson E, Tessema SK, Katzourakis A, Lessells R, de Oliveira T, Morais J. Francisco NM, et al. Among authors: giandhari j. Influenza Other Respir Viruses. 2023 Sep 22;17(9):e13198. doi: 10.1111/irv.13198. eCollection 2023 Sep. Influenza Other Respir Viruses. 2023. PMID: 37744993 Free PMC article.
Correction: Subramoney et al. Molecular Epidemiology of SARS-CoV-2 during Five COVID-19 Waves and the Significance of Low-Frequency Lineages. Viruses 2023, 15, 1194.
Subramoney K, Mtileni N, Giandhari J, Naidoo Y, Ramphal Y, Pillay S, Ramphal U, Maharaj A, Tshiabuila D, Tegally H, Wilkinson E, Oliveira T, Fielding BC, Treurnicht FK. Subramoney K, et al. Among authors: giandhari j. Viruses. 2023 Jul 4;15(7):1502. doi: 10.3390/v15071502. Viruses. 2023. PMID: 37515306 Free PMC article.
Performance of rapid antigen tests in identifying Omicron BA.4 and BA.5 infections in South Africa.
Samsunder N, Lustig G, de Vos M, Ngcapu S, Giandhari J, Tshiabuila D, San EJ, Lewis L, Kharsany AB, Cawood C, de Oliveira T, Abdool Karim Q, Abdool Karim S, Escadafal C, Naidoo K, Sivro A. Samsunder N, et al. Among authors: giandhari j. J Clin Virol. 2023 Aug;165:105498. doi: 10.1016/j.jcv.2023.105498. Epub 2023 Jun 2. J Clin Virol. 2023. PMID: 37329842 Free PMC article.
SARS-CoV-2 spike protein diversity at an intra-host level, among SARS-CoV-2 infected individuals in South Africa, 2020 to 2022.
Subramoney K, Mtileni N, Davis A, Giandhari J, Tegally H, Wilkinson E, Naidoo Y, Ramphal Y, Pillay S, Ramphal U, Simane A, Reddy B, Mashishi B, Mbenenge N, de Oliveira T, Fielding BC, Treurnicht FK. Subramoney K, et al. Among authors: giandhari j. PLoS One. 2023 May 30;18(5):e0286373. doi: 10.1371/journal.pone.0286373. eCollection 2023. PLoS One. 2023. PMID: 37253027 Free PMC article.
Molecular Epidemiology and Diversity of SARS-CoV-2 in Ethiopia, 2020-2022.
Sisay A, Tshiabuila D, van Wyk S, Tesfaye A, Mboowa G, Oyola SO, Tesema SK, Baxter C, Martin D, Lessells R, Tegally H, Moir M, Giandhari J, Pillay S, Singh L, Ramphal Y, Maharaj A, Pillay Y, Maharaj A, Naidoo Y, Ramphal U, Chabuka L, Wilkinson E, de Oliveira T, Desta AF, San JE. Sisay A, et al. Among authors: giandhari j. Genes (Basel). 2023 Mar 13;14(3):705. doi: 10.3390/genes14030705. Genes (Basel). 2023. PMID: 36980977 Free PMC article.
71 results